Oryza sativa japonica (Japanese rice): 4334542
Help
Entry
4334542 CDS
T01015
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP22
KO
K09567
peptidyl-prolyl isomerase H (cyclophilin H) [EC:
5.2.1.8
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4334542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4334542
03110 Chaperones and folding catalysts [BR:
osa03110
]
4334542
Enzymes [BR:
osa01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
4334542
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
4334542
Chaperones and folding catalysts [BR:
osa03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
4334542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
4334542
NCBI-ProteinID:
XP_015631920
UniProt:
Q0DMF1
Q7XZG9
LinkDB
All DBs
Position
3:complement(join(34968802..34968912,34969221..34969277,34969477..34969509,34970193..34970285,34970533..34970620,34971037..34971060,34971181..34971389))
Genome browser
AA seq
204 aa
AA seq
DB search
MASSGGAAISAGPTPPSAAAASSSVDWHLRPPNPKNPVVFFDVTIGSIPAGRIKMELFAD
IVPKTAENFRQFCTGEHRKSGLPQGYKGCQFHRVIKDFMIQGGDYMKGDGTGCTSIYGTK
FDDENFIAKHTGPGLLSMANSGVNSNGSQFFITCAKCEWLDNKHVVFGRVLGDGMLAVRK
IENVATGPNNRPKLACVISECGEM
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcggggggagcggcgatctcggcggggcccacgccgccgtcggcggcggcg
gcgtcgtcgtcggtggactggcacctgcggccgccgaacccgaagaacccggtggtgttc
ttcgacgtgaccatcgggtccatccccgccggccgcatcaagatggagctcttcgccgac
atcgtccccaagacggcggagaacttccggcagttctgcactggagagcacaggaaatca
ggtttaccacagggatataagggttgtcagttccatcgagtgatcaaagatttcatgatt
cagggaggtgactatatgaagggggatggtactggatgcacgtcaatctatggtaccaaa
tttgatgatgaaaacttcattgcaaagcatactggtcctggcctactttctatggcaaat
agtggggtgaactctaatggatctcagttctttataacttgtgcaaaatgtgaatggctg
gacaacaagcatgtggtttttgggagggtgctaggggatggtatgcttgctgtgcggaag
atcgagaatgttgcaactggaccaaacaaccgaccgaagctcgcatgtgtcataagcgag
tgtggtgagatgtag
DBGET
integrated database retrieval system
