Oryza sativa japonica (Japanese rice): 4334547
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Entry
4334547 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4334547
04121 Ubiquitin system [BR:
osa04121
]
4334547
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4334547
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
4334547
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4334547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
Zn_ribbon_19
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-RING_10
Zf_IFT144_1st
zf-RING_5
HypA
DUF7129
Motif
Other DBs
NCBI-GeneID:
4334547
NCBI-ProteinID:
XP_015632029
UniProt:
Q7XZF6
A3ANZ0
LinkDB
All DBs
Position
3:35005184..35006293
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AA seq
369 aa
AA seq
DB search
MEQGQGDRYWCHHCEEVIEPVEPDMKCPSCDSGFVEEMGSAGFEPSTNLRSDRISLWAPL
LLGMMGGSSRRARRLRRQIMEDDDDDDDDEDDEDDSDHELEDLFRRQRRGSSLVRLLQTL
RDDLRGLDDIGRDSDRDRERERRERERLRERERERERMRERERERRRERTESLILINSNN
EAIILQGTFGPDDNQDDSSNTSSGVSLGDYFLGPGLDILLQHLAESDLNRSGTPPAKKEA
VEALPTVNIQEVLGCSVCLEDFEMGTEAKEMPCQHKFHSQCILPWLELHSSCPICRFQLP
TEESKNPCESAGGIVSVNDDGDDAGTSSDVDSANQPGSPIFSALSALFSNPSSSSSSSSD
DNAPHSSES
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaggtcagggagatagatactggtgccaccactgcgaggaagtgatcgaacct
gtggagcctgatatgaagtgtcctagctgtgacagcgggttcgtggaagagatggggtct
gcaggctttgagccatcgaccaacttgaggtctgatcgtatctccctctgggcaccactg
ctgctcgggatgatgggaggctcatcgcggcgagcaaggcggctccgaaggcagatcatg
gaggatgatgacgacgacgatgacgatgaggatgatgaagatgattcagaccatgagctt
gaagacttgtttaggaggcagaggaggggctcatctcttgtaaggctgctccagaccctc
cgggatgacttgaggggcttggatgacattggcagggatagtgacagagacagggaaagg
gagagaagggagagggagaggctgagggagcgggagagggagagggagaggatgagagag
agggagagagaacggaggagagaaaggacagaaagcttgatactgatcaactccaacaat
gaggccattattctccaaggaacatttggacctgatgacaaccaggatgactcgagcaat
acaagttctggtgtttcacttggtgactactttcttggtcctggattagatatcctcttg
cagcatttggcggaaagtgatcttaatcgttctggtacaccacctgccaagaaggaagct
gtagaagcattgccaactgtgaacatccaggaagtgttaggctgttctgtctgtcttgag
gatttcgaaatggggacagaagcgaaggagatgccttgtcaacataagttccactcccag
tgcatacttccatggctggagctacacagttcttgcccaatctgtaggtttcagttgcct
accgaggagtcgaaaaacccatgtgaatcagccggtggaattgtgtcagtgaacgatgat
ggagatgatgctggtacaagtagtgacgtagatagtgctaaccaacctggtagtcctata
ttctctgctttgagtgcacttttctcaaatccatcatcctcatcctcatcctcatctgat
gataatgcaccacactcttctgagagctga
DBGET
integrated database retrieval system
