Oryza sativa japonica (Japanese rice) (RefSeq): 4334691
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Entry
4334691 CDS
T01015
Name
(RefSeq) flap endonuclease 1-B
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
osa03410
Base excision repair
osa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4334691
03410 Base excision repair
4334691
03450 Non-homologous end-joining
4334691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4334691
03400 DNA repair and recombination proteins [BR:
osa03400
]
4334691
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
osa04147
]
4334691
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.-
3.1.-.-
4334691
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
4334691
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
4334691
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
4334691
Exosome [BR:
osa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
4334691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
5_3_exonuc_N
Motif
Other DBs
NCBI-GeneID:
4334691
NCBI-ProteinID:
XP_015632894
UniProt:
Q75LI2
LinkDB
All DBs
Position
3:35046572..35052137
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AA seq
412 aa
AA seq
DB search
MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE
VTSHLQGMLNRTVRILEAGIKPVFVFDGEPPDMKKKELAKRSLKRDGSSEDLNRAIEVGD
EDLIEKFSKRTVKVTKKHNEDCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASED
MDSLTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSGCDYCENIR
GIGGQRALKLIRQHGYIEEVVQNLSQTRYSVPEDWPYQEVRALFKEPNVCTDIPDFLWTP
PDEEGLINFLAAENNFSPDRVVKSVEKIKAANDKFSLGRGKLLAPVANLTGSTSTAGKEP
KCILGGPGQVMKARSPLQVCKSSSLNFIHDNSKAFMLGRRSGFLRISTYASI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcaagggtttgacgaagctgctggcggagcacgcgccgggggcggcggtgagg
aggcgggtggaggattaccgcggccgcgtcgtcgccatagacaccagcctcagcatctac
cagttcctcattgtggtaggaaggaaaggaacagaagttctgaccaatgaggctggtgaa
gtcacaagtcatctgcagggcatgttgaaccgaactgttaggattctagaagcaggaata
aaacctgtttttgtgtttgatggtgagccacctgacatgaagaaaaaggaactggcaaaa
aggtctttgaagagagatggttcttccgaagatctaaatagagctattgaggttggagat
gaggatttaattgaaaaatttagcaaaaggactgtaaaggtcacaaaaaagcacaatgaa
gactgtaagaggctgttaagcttgatgggtgtccctgtagttcaggcaccaggggaggca
gaagcacagtgcgcagcactctgtgaaaatcacaaggtctttgctatagcttcggaggat
atggactctctaacttttggtgctagaaggtttcttcgccatttaaccgacctgagtttt
aagagatctcctgtaacagaattcgaagtgtcaaaggttttggaggaacttggactcaca
atggatcagttcattgatttgtgtatccttagtggctgtgactactgcgagaatattaga
ggtattgggggacagagagctttgaaacttattcgtcagcatggttatatagaagaagta
gtgcaaaatcttagccagacaaggtatagtgtcccagaagactggccttaccaggaagtt
cgggcattgtttaaggaacctaacgtttgtacagatattccagacttcctgtggacccca
ccagatgaggagggccttataaactttttggcagccgaaaataatttcagtcctgatcga
gtagtaaagtctgtagaaaagataaaggctgctaatgataaattttcccttgggcgaggg
aagcttttggcaccagtagcgaacttaacaggatctacatcaactgcagggaaggaaccc
aaatgtatcctgggtggtccagggcaagtcatgaaggctaggtcacctctacaagtgtgc
aagagctcaagcttgaacttcatacatgacaattcaaaagcgttcatgctgggcaggcga
tcaggatttctcagaatatctacatatgcttccatctga
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