Oryza sativa japonica (Japanese rice): 4334826
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Entry
4334826 CDS
T01015
Symbol
HSF13, HSF3, HSFA1, OsHsf-13, rHsf3
Name
(RefSeq) heat stress transcription factor A-1
KO
K09419
heat shock transcription factor, other eukaryote
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4334826 (HSF13)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
4334826 (HSF13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
CENP-F_leu_zip
Herpes_UL25
AFAP_C
ZK652
APG6_N
ENOX1
Exonuc_VII_L
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
4334826
NCBI-ProteinID:
NP_001389256
LinkDB
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Position
3:join(36968115..36968402,36969789..36971021)
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AA seq
506 aa
AA seq
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MEAAVAAAAAAAGAVTTAVAPPPGAAVSNGVATAPPPFLMKTYEMVDDPATDAVVSWGPG
NNSFVVWNTPEFARDLLPKYFKHSNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHL
LKTINRRKPTHGNNQVQQPQLPAAPVPACVEVGKFGMEEEIEMLKRDKNVLMQELVRLRQ
QQQTTDHQLQTLGKRLQGMEQRQQQMMSFLAKAMHSPGFLAQFVQQNENSRRRIVASNKK
RRLPKQDGSLDSESASLDGQIVKYQPMINEAAKAMLRKILKLDSSHRFESMGNSDNFLLE
NYMPNGQGLDSSSSTRNSGVTLAEVPANSGLPYVATSSGLSAICSTSTPQIQCPVVLDNG
IPKEVPNMSAVPSVPKAVAPGPTDINILEFPDLQDIVAEENVDIPGGGFEMPGPEGVFSL
PEEGDDSVPIETDEILYNDDTQKLPAIIDSFWEQFLVASPLSVDNDEVDSGVLDQKETQQ
GNGWTKAENMANLTEQMGLLSSHHTG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgttgctgctgcggctgcggccgccggggcggtgacgacggcggtcgcg
cctccgcccggcgcggcggtcagcaacggggtggcgaccgcgccgccgccgttcctgatg
aagacgtacgagatggtggacgacccggccaccgatgccgtcgtctcatggggccccggg
aacaacagcttcgttgtgtggaacacccccgagttcgcgcgcgacctcctccccaagtac
ttcaagcacagcaacttctcctccttcgtcaggcagctcaacacctacggatttaggaaa
gttgatccagataggtgggagtttgcaaacgaaggttttcttagaggacaaaagcatcta
ctgaagaccatcaacagaaggaaaccaactcatggaaacaaccaagttcagcagcctcag
ttgccagctgctcctgtacctgcttgcgtagaagtggggaagtttgggatggaagaagag
attgagatgctcaaaagggataaaaatgttttaatgcaggaacttgtcaggctgagacaa
caacagcagacaacagatcatcagctgcagactttgggcaagcgtcttcaaggaatggag
caacggcaacaacaaatgatgtctttcctggctaaggcaatgcatagtcctggcttccta
gcacaatttgtacagcaaaacgaaaacagcagaagaagaatagttgctagtaacaaaaag
aggaggctaccaaagcaggatggttcgttggactctgaaagtgcttcattggatggacaa
atagtaaaatatcaacctatgatcaatgaagcagccaaagcgatgctaaggaagatccta
aagctagattcttcacatagatttgaatccatgggcaattcagataatttccttcttgag
aattatatgccaaatggtcaaggtcttgacagctcttcatcaactcggaattctggtgtt
acccttgcagaggtcccagctaactcaggtttgccatatgtagctacaagctctggactt
tcagctatttgttcaacttcgactcctcagattcagtgcccagttgttttggacaacggc
atacccaaagaagttccaaacatgagtgcggtgccttctgttccgaaggctgtggctcca
ggcccaactgatatcaatattctggaattcccagatttgcaagatatagtagctgaagaa
aatgttgatattcctggagggggctttgaaatgcctggtcctgagggtgtattctctttg
cctgaagaaggtgatgatagtgttcccattgagactgatgagattttgtacaacgatgac
acccagaaacttcctgctatcattgattctttctgggaacagttcctggtggctagccct
ctatctgttgataatgatgaagtcgattcaggtgtactagaccaaaaggaaacacaacag
gggaatggatggaccaaagctgaaaacatggctaaccttacagaacagatgggcctcctg
tcatcacaccatacaggatga
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