KEGG   Oryza sativa japonica (Japanese rice): 4334849
Entry
4334849           CDS       T01015                                 
Name
(RefSeq) protein EXPORTIN 1A isoform X1
  KO
K14290  exportin-1
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03008  Ribosome biogenesis in eukaryotes
osa03013  Nucleocytoplasmic transport
osa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4334849
   03008 Ribosome biogenesis in eukaryotes
    4334849
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    4334849
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4334849
   03009 Ribosome biogenesis [BR:osa03009]
    4334849
   03016 Transfer RNA biogenesis [BR:osa03016]
    4334849
   03036 Chromosome and associated proteins [BR:osa03036]
    4334849
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     4334849
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    4334849
  Pre-60S particles
    4334849
Transfer RNA biogenesis [BR:osa03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    4334849
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     4334849
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 IBN_N CRM1_repeat mTOR_dom
Other DBs
NCBI-GeneID: 4334849
NCBI-ProteinID: XP_015632087
UniProt: Q84M87
LinkDB
Position
3:complement(join(37192206..37192328,37192771..37192875,37192947..37193078,37193156..37193293,37193374..37193481,37193610..37193720,37193807..37193873,37194036..37194218,37194315..37194395,37194930..37195015,37195612..37195701,37195784..37195864,37195956..37196054,37196230..37196295,37196552..37196660,37196737..37196834,37196971..37197081,37197470..37197529,37197661..37197861,37198030..37198125,37198208..37198315,37198594..37198638,37198750..37198809,37198920..37198997,37199226..37199294,37199384..37199522,37199663..37199745,37199813..37199920,37200032..37200103,37200205..37200297,37201252..37201368,37201802..37201897))
AA seq 1070 aa
MAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVVHILQNS
HNLNTKFFALQVLESVIKYRWNALPTEQRDGIKNYISDVIVQLSSNEASFRQERLYVNKL
NIILVQVLKHEWPARWSSFVPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRPELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPMAAYRNLTLQCLTEVAALQFGDFYNVQYVKMYTIFMMQLQAILPPGTIPDAYANG
SSEEQAFIQNLALFFTSFFKNHMRILEASPENRAALLLGLEYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAASVNMMGLQAQMLPGVDGTITAVQQRRQLYSGPLSKLRMLM
ICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKKL
SKQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAVI
ASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKFV
TQQVGENEPFVSELLSSLATTIGDLEPHQIHTFYESVGHMIQAESDNTKRDEYLKRLMSL
PNQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTV
YRMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPPM
MDPILADYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFED
YPEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLEI
LKNFQASGFQNQFYKTYFLNIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPLW
DASSVPYQYTDNAMFVRDYTIKLLGSSFPNMTPTEVTKFVDGLLSSKHDLPSFKNHIRDF
LVQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDEMVDS
NT seq 3213 nt   +upstreamnt  +downstreamnt
atggcggagaagctgagggatctgagccagcccatagacgtcccgctgctggacgccact
gtcgccgccttctacggcaccggatctaaggaagagaggaatgccgctgatcagatacta
cgggatctacagaataatccagatatgtggctgcaggtggtccacattctgcagaattct
cacaacttgaacaccaagttctttgccctccaagtacttgaaagtgttataaagtatagg
tggaatgcattgccaactgaacaacgtgatggcatcaagaattacatatctgatgttatt
gtccagctctccagtaatgaggcttcttttcggcaagagagactttatgttaataaactc
aacattatactggtgcaggttctgaagcatgagtggccagctaggtggtcatctttcgtt
cctgaccttgttgctgctgcaaagagtagtgaaaccatatgcgaaaattgcatggctata
ttgaagcttttaagcgaagaaatttttgatttttcaagaggtgaaatgacacaacagaag
attaaagaactgaagtcatcacttaacagtgaatttcgtcttattcatgagctatgttta
tatgtcctatctgcaacacaaagacctgagctcatccgtgctacactggctacacttcat
gctttcttatcatggataccagtgggcttcatatttgagtcacctttgctggagacatta
ctgaagttctttcctatggctgcttatcggaaccttacactccagtgccttacagaggtc
gctgctcttcagtttggtgatttttataatgtgcagtatgtgaagatgtatacgattttc
atgatgcagttgcaggctattcttcctcctggaacaattcctgatgcttatgctaatggc
tccagtgaagaacaggcattcatacaaaatctagctctttttttcacttctttcttcaag
aatcacatgcgcatattggaggcatctccagaaaatagagctgcattacttctgggcctt
gagtacctcattggaatttcatatgttgatgacacagaggtttttaaggtgtgtttggat
tactggaatgtgtttgttttagagctatttgaagcacacaatcaaatggagcctgcagca
tctgtaaacatgatgggacttcaggctcagatgctccctggagttgatggcaccatcaca
gctgttcagcagaggcgtcagctttactcaggcccactatcaaaattacgaatgttgatg
atttgtcggatggcaaaaccagaggaggtactgattgtggaagatgaaaatgggaatatt
gtacgtgaaacaatgaaagacaacgatgttcttgtccagtataagattatgagggaaaca
ctgatctacttgtctcatcttgatcatgaggatacagagcagcaaatgctgaagaaattg
agtaagcaattaaatggagaagactggagttggaataacctcaatactctctgctgggca
atcggatcaatatctggttctatggtggaggaacaggaaaataggttcttggtaatggtt
attcgcgatttattaaatctctgtgaaatcacaaaggggaaggataataaagctgtgatt
gccagtaacatcatgtatgttgttggtcagtacccaagatttctcagggctcattggaag
ttcttgaaaacggtggttaacaaactatttgagttcatgcatgagatgcatcctggagtt
caggatatggcgtgtgatacttttctgaaaattgttcagaaatgcaagcgcaaatttgtc
acacaacaggtgggcgagaacgaaccatttgtttctgaactgttgtccagccttgccacg
acaattggtgatcttgagccgcaccagattcatacgttttatgaatcggttggccacatg
attcaagctgaatctgataacactaagagagatgaatacctcaaaagactgatgagcctc
cctaatcagaaatgggccgagataattggacaggcaagccaaagcattgatatcctgaag
aaccaggatgttattagatctgttcttaacatcctgcagacaaacacaagtgttgctagc
tcacttggaccacactttttcccgcaaatttccctaatctttcttgacatgttgacagtt
tacagaatgtacagtgagcttgtatcaagcaccattgctgaagggggaccttttgcctca
aggacctcctttgtaaaactccttagatctgtcaagagggaaacattgaaattgattgag
acttttgtggacaaagctgaagatctaccacacattgggaaacagtttgttcctcctatg
atggatcctattcttgctgactatgctagaaatgttcccgatgctagggaatctgaagtt
ctgtccctgtttgcgacgatcataaacaaatacaaaggtgaaatgcttgaagacgtgcct
cgcatatttgaggctgttttccagtgcactcttgagatgatcactaaaaactttgaagat
tacccggagcatcgcctcaaatttttctctttgcttcgtgcgattggcacccattgcttc
caagcattaattcagctttcaagtcagcaattgaaacttgtgattgactctatcaactgg
gcatttagacatacagagagaaacatcgcagagactggtctcagtctattgctggaaatt
ttaaagaactttcaggcctcaggattccaaaatcaattctacaaaacttattttttgaat
attgaacaagagatctttgcagttctgacagacacattccacaagcctggtttcaagctt
catgttttggtgctgcagcacttattttgtgtggttgatggtctgacggagcctctctgg
gatgcatcctcagtaccataccaatatactgacaacgctatgtttgtccgagattacaca
ataaaacttttaggttcatcatttcccaacatgacacctactgaggttacaaaatttgtt
gatgggcttcttagttcaaaacatgaccttccaagcttcaaaaaccatattagggatttc
ctggtgcaatcaaaggagttctcggctcaggataataaggatttgtatgctgaagaggct
gctgcacaaagagagagggagcgtcaacgaatgcttgccattccagggcttattgcccca
agcgaattacaagatgagatggttgattcataa

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