Oryza sativa japonica (Japanese rice): 4334954
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Entry
4334954 CDS
T01015
Name
(RefSeq) ARF guanine-nucleotide exchange factor GNL2
KO
K18443
golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4334954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4334954
Membrane trafficking [BR:
osa04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
4334954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
Sec7-like_HUS
TPR_28
DCB
Motif
Other DBs
NCBI-GeneID:
4334954
NCBI-ProteinID:
XP_015635165
UniProt:
Q7XT11
LinkDB
All DBs
Position
4:complement(join(1105075..1107324,1107522..1108410,1108475..1109559))
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AA seq
1407 aa
AA seq
DB search
MARTAAAAVSDDDDDGPPAYTVPRGPRRDPRLKDLGISCMLNTEVAALLAVIRRRPDPYS
YLPPAVAAAEEATFAGLIQSLKNLRGLLFQPRHGAWRCSDPAMYLKPFLDVVQSEESPPA
ATGVALSSVLKILRIDVFDECSPGARDAIQAVLTAVSSCRVERIADPGAEEAVLLRVLQV
LAALLRARAAPLLSDHAVCNAVNTCFQVVQHAASGRGSELLQRTARHCMHEILQAVFARL
PDIPAADAADADDLSVAGFGARCMADIFNFLCTLLLNAPDMVATGDGHGAFITEEDVQLF
SLVLINSAIELGGEAIGKHPKLLRLIQDDLFYHLIHYATESSPLVLSMICSTALNLYHFL
RRFLKLQLEAFFMYVLLRLCGGGGGAQLQEVAIEGLISFCRQPTFVIEMYVNYDCDPMLR
NVYEEVGKLLCKAAFPASSPMTTVQLQAFEGLVNMLTTIADNVEVDKAPDHAAYAVDISD
YRLFWVERWDAAAAGGSGNNETWVDFVRKRKLRKKKVAIAANHYNRDEKKGMEYLRLSQL
VPTPPEPRSMAFFLRYSPGLDKNKIGELLGDPEEQSLRVLKEFTETFDFTGVILDTALRT
YLETFRLPGESQKIQRILEAFSERFYEQQTAEVFATKDAAFILCYSLIMLNTDLHNPQVK
KKMSEDDFIRNNRAINAGKDLPREYLSELFHSISGNAITVFSQASAAAEMTPTRWADLVK
RSRAIDPFTPCDFKHKLTREVFVTVSGPAVATLAAIFDYTDDEDILNQCVEGLISVARIA
RYGLEDVLDELLCCLCKFTTLLNPYATTEETLFTFSNELKPRMATLALFTITNRFGESVR
GAWKNVVDCLLKLKRLKLLPPSLVDQEGGAGAAVSTERLGHRAKSESGVIFPSSHRGAGT
SRHVSGMIGRFSQFLSLDAGGESLLSVGSEFENNLKIIQQCRIGSIFTESGKLPDESVQN
LGRALIFAAGGKGQKFSTPVEEEETVGFCWDLIAVVSSANVHRFTTFWPQLHDCFAAVSQ
LPLFSPCPFAEKAIVALFRVAVRLLSGGGGDRMAEELVFKSINLMWKLDKEILDTCCEGI
SECIVKLLMEYASNVQTPIGWKTVLHLLSVTGRHPETFDQSVAAMIKLMNDGAQVVTRFN
YAACIEAAFGFAALKISPLDISTRILQLMADSVNWLILWHKSGYSDPGNAWSSSSSSSSA
AAMMMMEDASRMGNLATSMFIKLAEALRKTSLVRREEIRNQAVAELGRAFALAAAGELEL
GPTGSLACFNLVIFAMVDDLHEKTLEYSRREGAERETRSMEGTLAAATELLADVFVLFLG
TLAQGAGFRTFWLGVLRRLDTCIKSDLAAGGGAGVMQELVPRMLKRMIVEMKDKGVLVAM
EGDELWEITHIQIQWIAPAVMEELFPD
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggacggcggcggcggcggtctccgacgacgacgacgatggcccgccggcgtac
accgtgccacggggcccccgccgtgaccccaggctcaaggacctcggcatctcctgcatg
ctcaacaccgaggtggccgcgctcctcgccgtcatccgccgccgcccggacccctactcc
tacctcccgccggcggtcgccgccgcggaggaggcgacgttcgccgggctcatccagtcg
ctgaagaacctgcgggggctcctcttccagccccggcacggtgcctggcgctgctccgac
ccggccatgtacctgaagccgttcctcgacgtggtccagagcgaggagtcgccgccggcg
gccaccggcgtggcgctgtcgtcggtgctcaagatcctgaggatcgacgtgttcgacgag
tgctccccgggcgcccgcgacgcgatccaggcggtgctgacggcggtgagcagctgccgc
gtggagcgcatcgccgacccgggcgccgaggaggccgtcctcctccgcgtgctgcaggtg
ctcgccgcgctgctccgcgcccgcgccgcgccgctcctctccgaccacgccgtctgcaac
gccgtcaacacctgcttccaggtggtgcagcacgccgccagcggccgcggcagcgagctc
ctccagcgcacggcgaggcactgcatgcacgagatcctccaggccgtcttcgcccgcctg
cccgacatcccggccgccgacgccgccgacgccgacgacctgtccgtggccggcttcggc
gcgcgctgcatggccgacatcttcaacttcctctgcacgctgctgctcaacgcccccgac
atggtggccaccggggacggccacggcgcgttcatcaccgaggaggacgtgcagctcttc
tccctcgtcctcatcaactccgccatcgagctcggcggcgaggccatcggcaagcacccc
aagcttctccgcctcatccaggacgacctcttctaccacctcatccactacgccactgag
tccagccctctcgtcctctccatgatctgcagcacggctctcaacctctaccacttcttg
cgccggttcctgaagctgcagctcgaggcgttcttcatgtacgtgctgctccggctgtgc
ggcggcggaggcggggcgcagctccaggaggtggcgatcgaggggctgatcagcttctgc
cggcagccgacgttcgtgatcgagatgtacgtgaactacgactgcgacccgatgctgcgg
aacgtgtacgaggaggtggggaagctgctgtgcaaggcggcgttcccggcgtcgagcccc
atgacgacggtgcagctccaggcgttcgagggcctcgtcaacatgctcaccaccatcgcc
gacaacgtcgaggtcgacaaggcccccgaccacgccgcctacgccgtcgacatctccgac
taccgcctcttctgggtggagcgctgggacgccgccgccgccggcggctccggcaacaac
gagacgtgggtggacttcgtccgcaagcggaagctgaggaagaagaaggtggcgatcgcg
gcgaaccactacaaccgcgacgagaagaaggggatggagtacctccggctgagccagctg
gtgcccaccccgccggagccccggagcatggccttcttcctccgctactcgccggggctg
gacaagaacaagatcggcgagctcctgggcgacccggaggagcagagcctgagggtgctc
aaggagttcacggagacgttcgacttcaccggcgtgatcctggacacggcgctgcgcacc
tacctggagacgttccgcctccccggcgagtcgcagaagatacagcggatcctggaggcg
ttctcggagaggttctacgagcagcagacggcggaggtgttcgccaccaaggacgccgcc
ttcatcctctgctactccctcatcatgctcaacaccgatctccacaacccacaagtgaag
aaaaagatgtcggaggacgacttcatccgcaacaaccgtgccatcaacgccggcaaggac
ctccccagggagtacctctccgagctcttccactccatctccggcaacgccatcaccgtc
ttcagccaggcctccgccgccgccgagatgacgcccaccagatgggccgacctcgtcaag
cgctcccgcgccatcgaccccttcaccccctgcgacttcaagcacaagctcacccgcgag
gtgttcgtcaccgtctccggccccgccgtcgccaccctcgccgccatcttcgactacacc
gacgacgaggacatcctcaaccagtgcgtcgagggcctcatctccgtcgcccggatcgcg
cgctacggcctcgaggacgtcctcgacgagctcctctgctgcctctgcaagttcaccacg
ctgctcaacccctacgccaccaccgaggagacgctcttcaccttcagcaatgagctcaag
cccaggatggccacgctcgcgctcttcaccatcaccaaccgcttcggcgagtcggtgcgc
ggcgcgtggaagaacgtcgtcgactgcctgctcaagctcaagcgcctcaagctgctgccg
ccgtcgctggtcgaccaggagggcggcgccggcgccgccgtgagcacggagcggctggga
caccgggccaagtcggagtccggcgtcatcttcccgtcgtcgcaccgtggcgccgggacg
agcaggcacgtgtccggcatgatcgggcggttctcgcagttcctgtcgctggacgccggc
ggcgagtcgctgctgtcggtggggagcgagttcgagaacaacctcaagatcatccagcaa
tgccggatcgggagcatcttcacggagagcgggaagctgccggacgagtcggtgcagaac
ctggggcgggcgctcatcttcgccgccggcggcaaggggcagaagttcagcacgccggtg
gaggaggaggagacggtgggcttctgctgggacctcatcgcggtcgtctcgtcggcgaac
gtgcaccgcttcaccacgttctggccgcagctgcacgactgcttcgccgccgtgtcccag
ctgccgctcttctcgccgtgcccgttcgccgagaaggcgatcgtggcgctgttcagggtc
gccgtgaggctgctctccggcggcggcggggaccggatggcggaggagctggtgttcaag
tcgatcaacctgatgtggaagctggacaaggagatcctggacacctgctgcgaaggcatc
tcggagtgcatcgtgaagctgctgatggagtacgccagcaacgtgcagacgccgatcggg
tggaagacggtgcttcacctgctgtccgtcaccgggcggcacccggagacgttcgaccag
tcggtggccgccatgatcaagctcatgaacgacggcgcgcaggtggtgacgcggttcaac
tacgcggcgtgcatcgaggccgccttcgggttcgcggcgctcaagatcagcccgctcgac
atcagcaccaggatcctccagctcatggccgactccgtcaactggctcattttatggcac
aagtccggctactccgacccgggcaacgcctggagcagctcaagctcgtcgtcgtcggcg
gcggcgatgatgatgatggaggacgcgtcgcggatgggcaacctggcgacgagcatgttc
atcaagctcgcggaggcgctgcgcaagacgagcctagtccggcgagaggagatacggaac
caggcggtggcggagctgggccgagcgttcgccctggccgccgccggcgagctcgagctg
ggcccgacggggtcgctggcgtgcttcaacctggtcatcttcgccatggtggacgacctg
cacgagaagacgctggagtactcgaggagggagggggcggagagggagacccggagcatg
gaggggacgctggcggcggcgacggagctgctcgccgacgtgttcgtgctgttcctgggg
acgctggcgcagggggcggggttcaggacgttctggctgggggtgctccggcggctggac
acgtgcatcaagtcggacctggcggcgggcggcggcgccggcgtgatgcaggagctggtg
ccgaggatgctgaagcggatgatcgtggagatgaaggacaagggggtgctggtcgccatg
gaaggagacgagctgtgggagatcacccacatccagatccagtggatcgctccagctgtc
atggaggagctcttccctgattga
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