Oryza sativa japonica (Japanese rice): 4334964
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Entry
4334964 CDS
T01015
Name
(RefSeq) serine/arginine-rich splicing factor RS31 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4334964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4334964
Spliceosome [BR:
osa03041
]
Common components
Common spliceosomal components
SR proteins
4334964
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
SET_assoc
RNA_bind
Motif
Other DBs
NCBI-GeneID:
4334964
NCBI-ProteinID:
XP_015633436
UniProt:
B9FD42
Q7XTJ6
LinkDB
All DBs
Position
4:complement(join(1204123..1204180,1204558..1204785,1206337..1206569,1206715..1206827,1207887..1207992))
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AA seq
245 aa
AA seq
DB search
MRPVFVGNLDYDTRHSELDRLFYRYGRIDRIDMKSGFAFVYFEDERDGDEAIRALDGYPF
GPGRRRLSVEWSRGDRGSRRDGYSKPPVNTKPTKTLFVINFDPINTRVTDIERHFEPFGK
LSNVRIRRNFAFVQFETQEEATKALEATHSTKLLDRVISVEYAFRDDTERGDRYDGARGG
YGRRDDSPYRRSVSPVYRSRPSPDYGRQRSPVYGSYDRSPVNDRYRSRSPVRRSRSPLAN
RRAYD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaggcccgtgttcgtggggaacctcgactacgacacccgccactccgagctcgaccgc
ctcttctaccgctacggcaggatcgaccgcatcgacatgaagtcaggatttgcttttgtc
tactttgaggatgagcgtgatggtgatgaggccatacgagcccttgatggctatcctttt
ggccctgggaggcgcaggctttcggtggagtggtcacggggtgatcgtggttccaggcgt
gatggctatagcaaaccacctgtgaatactaaacccacgaagacactatttgtcattaac
tttgaccccatcaacaccagagtcactgatatcgaaaggcatttcgaaccatttggaaag
ctttcgaatgttcggatcaggaggaactttgcttttgtgcagtttgaaacacaggaagag
gccacaaaagcacttgaagctactcattctaccaagttgttggacagggtgatttctgtt
gagtatgccttcagggatgatacagaacgaggtgacaggtatgatggtgcaagaggtggc
tatggtaggcgagatgatagtccatatcgtcgatcagttagtccagtgtacaggtcacgc
ccaagtcctgactacggtcgtcaaaggagtcctgtgtacggttcgtatgacaggagtcct
gttaatgatcgctatcgaagccgatctcctgtccggcgatcaagatccccacttgccaac
agaagagcttatgattga
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