Oryza sativa japonica (Japanese rice): 4335002
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Entry
4335002 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13205
A1 cistron-splicing factor AAR2
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4335002
Spliceosome [BR:
osa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
4335002
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Gene cluster
GFIT
Motif
Pfam:
AAR2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
4335002
NCBI-ProteinID:
XP_015634012
UniProt:
B9FDG5
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All DBs
Position
4:join(2105241..2105366,2105454..2105536,2106634..2106691,2107451..2107510,2108478..2108607,2108693..2108919,2109098..2109190,2109267..2109338,2110108..2110140,2110264..2110404,2111259..2111315,2111781..2111867,2111953..2111988)
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AA seq
400 aa
AA seq
DB search
MSSGGGAAAAVDPEAATELVRKGATLLLLDVPQRTLLGVDTQVFSVGPKFKGIKMVPPGP
HFLYYCSPNRHANEFAPTVGFFLTTHPSEVIVRKWHAQEERLIKLPEEEEIRYSEAVRHF
EFDSQLGPYNLDSFGDWKQLSSYLPQSVIERLEPIGGEITIAWESSWMDKAPQTDMERRL
MDQLKDGKFAKNAPVQSERRGCYYTTIPASIKHSNISGDELTALNLDKTCLLESVLAKNY
QGQEDLLLGELQFAFIAFMMGQSLEAFMQWKALVSLLLSCSEAPLHTRTNLFVKFIRAIY
YQLKHGFQHTQDNRSGEEMGNSLFLDEAWFSRDIFLYRLSKDFFAVILEATVVDGDLLSW
TRKLKSLLETTFGWDLDNNTVNLIDEDDEFAPVVVEMDGS
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcggcggcggcgcggcggcggcggtggacccggaggcggcgacggagctggtg
cggaagggcgccacgctcctcctcctcgacgtgccccagcgcaccctcctcggcgtcgac
acccaggtgttctccgtcgggcccaagttcaaggggatcaagatggtgcctccggggccg
catttcctctactactgctcccccaacaggcacgcaaatgagttcgcacctactgtcgga
ttctttcttactactcacccatctgaggtgattgttcggaagtggcatgcacaggaggag
agattaataaaactaccagaagaggaggaaatcagatattctgaagcagtaagacatttc
gagtttgacagtcagcttggaccatataatttggattcatttggagattggaaacaactc
tcaagctacttgccacaaagtgtcattgaacgtcttgagccaattggtggagaaattaca
attgcatgggagtcatcatggatggataaagctccgcaaacagacatggagagacgttta
atggaccaactaaaagatggaaaatttgcaaagaatgctcctgtgcagtctgagcggaga
ggatgctactatacaactatccctgcttcaattaagcatagtaacatctctggggatgag
ctaactgcattaaatctggacaaaacatgcttgctggagagtgttttggccaagaattac
caaggccaagaggatttactcttgggagagctgcagtttgctttcatagcatttatgatg
gggcagtcactggaggcttttatgcaatggaaagcattagttagtcttcttttgagctgt
agtgaagctcctcttcatacaaggactaacttgtttgtaaagtttattagggcaatttac
tatcaactcaagcatggctttcagcacacacaggataatagaagtggtgaggaaatgggg
aattctctgttcttagatgaagcatggttttcaagagacatatttctctatcgtctttct
aaggatttctttgcggtgatacttgaagctacagttgttgatggtgaccttctgtcatgg
actcgaaaactaaaatcacttctggagaccacatttggatgggatcttgacaacaatacg
gtgaatctaattgatgaagatgatgagtttgctcctgtggtcgtggaaatggatgggtca
tag
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