Oryza sativa japonica (Japanese rice): 4335010
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Entry
4335010 CDS
T01015
Name
(RefSeq) ornithine decarboxylase 1A, chloroplastic-like
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00330
Arginine and proline metabolism
osa00480
Glutathione metabolism
osa01100
Metabolic pathways
osa01110
Biosynthesis of secondary metabolites
osa04148
Efferocytosis
Module
osa_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
4335010
09106 Metabolism of other amino acids
00480 Glutathione metabolism
4335010
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
4335010
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
4335010
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-GeneID:
4335010
NCBI-ProteinID:
XP_066166303
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All DBs
Position
4:2508461..2509693
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AA seq
410 aa
AA seq
DB search
MAGGRPLESVLVAPGVKGKKVLAFKRDGLKKNEAVTGLIHDIVASSSARSAFHVLDLAKV
VDLYAGWRRALPGVRPFYAVKCNPDTALLGALAALGAGFDCASRAEIEAVLALGVPPAAI
VYANPCKPGAHVAFAAEAGVNVTTYDSEEEVAKVKRCHPSCELLLRIKAPDCGGVKVDLG
LKYGANPDEVLPLLRAARRAGLGVAGVSFHVGSGASRAAVYRGAIEAARAAFDAAAGLGM
PPMRVLDIGGGFVAGAAFGDAAAVINRALGRYFGDLLPTVELIGEPGRYFAETAFTLAAR
VIGKRRRGDVREYWIDDGVYGSLNCILLDSYVPRPRPLAGARPGEETHASTVFGPTCDSI
DTVVTGYQLPEMSVDDWLVFDDMGAYTTAAGSSFNGFATSAINTYLAYSS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggaagacccttggagtcggtgctcgtggcccccggggtgaagggaaagaag
gtactcgcattcaagcgcgacgggctcaagaaaaacgaggcagtgacgggcctcatccac
gacatcgtcgccagctccagcgccaggagcgcgttccacgtcctggacctcgccaaggtg
gtcgacctctacgcgggatggcgccgcgcgctccccggcgtgaggcccttctacgccgtc
aagtgcaacccggacacggcgctgctcggcgcgctcgccgcgctcggcgccggcttcgac
tgcgccagccgcgccgagatcgaggccgtcctcgcgctcggcgtcccgcccgccgccatc
gtctacgctaacccgtgcaagcccggcgcgcacgtcgcgttcgccgccgaggccggcgtc
aacgtcaccacgtacgattccgaggaggaggtggccaaggtgaagcgctgccaccccagc
tgcgagctgctgctccgcatcaaggcgccggactgcggcggcgtcaaggtcgacctcggc
ctcaagtacggcgccaacccggacgaggtgctgccgctgctgcgcgccgcgcgccgcgcg
ggcctcggcgtggccggcgtgtcgttccacgtcggcagcggcgcgtcccgcgcggccgtc
taccgcggcgccatcgaggccgcgcgcgcggcgttcgacgcggccgcggggctcgggatg
ccgccgatgcgcgtcctggacatcggcggcgggttcgtcgccggcgccgcgttcggcgac
gcggcggcggtaatcaaccgcgcgctcgggcgctactttggcgacctcctccccaccgtc
gagttgatcggcgagcccggccggtacttcgccgagaccgccttcacgctcgccgcgcgc
gtcatcgggaagcgcaggcgcggcgacgtgcgcgagtactggatcgacgacggcgtctac
ggctcgctcaactgcatcctcctggacagctacgtgccgcgcccgaggccgctcgccggc
gcgcgccccggcgaggagacgcacgcctcgacggtgttcgggccgacgtgcgactccatc
gacacggtggtgaccgggtaccagctgccggagatgagcgtcgacgactggcttgtgttc
gacgacatgggcgcctacaccactgcggccggctccagcttcaacggctttgccacgtca
gccataaacacctacctggcatactccagctag
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