KEGG   Oryza sativa japonica (Japanese rice): 4335025
Entry
4335025           CDS       T01015                                 
Symbol
AGO4B, OsAGO4b, OsJ_13701
Name
(RefSeq) protein argonaute 4B
  KO
K11593  eukaryotic translation initiation factor 2C
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4335025 (AGO4B)
   03036 Chromosome and associated proteins [BR:osa03036]
    4335025 (AGO4B)
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     4335025 (AGO4B)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    4335025 (AGO4B)
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     4335025 (AGO4B)
   microRNA pathway
    RISC loading complex
     4335025 (AGO4B)
SSDB
Motif
Pfam: Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid
Other DBs
NCBI-GeneID: 4335025
NCBI-ProteinID: NP_001405999
LinkDB
Position
4:complement(join(3647600..3647775,3647873..3647904,3647988..3648082,3648182..3648255,3648356..3648467,3648705..3648768,3648897..3648962,3649065..3649192,3649324..3649461,3649546..3649658,3649730..3649895,3649967..3650080,3650164..3650226,3650316..3650423,3650527..3650643,3650739..3650904,3651061..3651158,3651255..3651352,3651497..3651633,3651773..3651997,3652090..3652295,3652405..3652644))
AA seq 911 aa
MDAHDGEADELPPPPPVPANVVPIKADDVESEVPANKPAKPKRFPMARPGLGRKGQPIQL
LANHYKVSVKSSEEYFFHYNVILKYEDDRPVDGKGVGRKVIDKLQQTYRSELSSKDFAYD
GEKSLFTIGALPQVTNEFTVVLEDVSTGKTAANGSPGGNDSPGGSDRKRVRRPYQTKTFK
VELCFAAKIPMNAIAQAIKGQESENSQEALRVLDIILRQHSAKQGCLLVRQSFFHNNPNN
FVDLGGGVMGCRGFHSSFRGTQSGLSLNIDVSTTMIVKPGPVIDFLLANQKVDHPDRIDW
QKAKRALKNLRIRTTPVNSEFKIIGLSDRNCNEQMFSLRQRNGNNGDVDEVEVTVYDYFV
KNKGIELRYSGNLPCINVGKPKRPTYFPIELCSLIPLQRYTKALSTLQRSSLVEKSRQKP
QERMSVLNDALRHSNYDSDPMLRASGISIAQNFTQVEGRVLQPPKLKAGNGEDIFPRNGR
WNFNNKKLIQTCSVDKWAVVNFSARCDVRNLIRDLIRNASAKGIQMAEPFDVFEESPSLR
RAPVSRRVDDMFEQIKSKLPGAPKFLLCLLPERKNCEVYGPWKRKCLAEFGIVTQCLAPQ
RVNDQYLLNLLLKINAKLGGINSLLQIEASPSIPLVSKTPTIILGMDVSHGQPGQSDRPS
IAAVVSSRQWPLISKYRASVHTQSPKLEMMSSLFKPRGTEDDGLIRESLIDFYTSSGKRK
PDHVIVFRDGVSESQFTQVINIELDQIIEACKFLDEKWSPKFTVIVAQKNHHTKFFQSGS
PDNVPPGTVVDKQVCHPRNYDFYMCAHAGMIGTTRPTHYHVLHDEIGFSPDDLQELVHSL
SYVYQRSTTAISVVAPICYAHLAAAQVGTFLKFEDMSDASSSQGGHTSVGSVPVPELPRL
HEKVRSSMFFC
NT seq 2736 nt   +upstreamnt  +downstreamnt
atggacgctcatgatggtgaggccgatgagttgccgccgcctcctcccgtacctgcaaat
gtggtgcctattaaagctgatgacgttgagagcgaggtgccagcaaacaaaccagcaaaa
cctaagcggtttccaatggccaggcctggtttagggagaaaaggacagccaatccagctc
ttggcgaatcattacaaagtttctgtgaagagtagtgaagaatatttcttccactacaat
gttattctgaagtatgaggatgatcgaccggttgatgggaaaggggtaggtcgaaaggtg
attgataaactgcagcaaacctaccgttctgagctttcaagcaaggactttgcctatgat
ggtgaaaagagcctgtttacaattggtgctcttccacaagtaactaatgagttcacagtg
gtgttggaggatgtttcaactggaaagactgctgccaatggaagccctggaggtaatgac
agccctggaggtagtgacaggaagagagttaggagaccataccagaccaagactttcaaa
gtggagctgtgctttgcagcaaagatccctatgaatgcaattgctcaggccataaaaggt
caagaatcagagaactcccaagaagctctcagagttcttgatataatattaaggcagcac
tctgctaaacagggctgccttttagtacgccagtcatttttccacaacaatcctaataac
tttgttgacctgggtggtggtgtgatgggctgtcgaggattccattcaagtttccgtggc
acacagagtggactttctctgaatatcgatgtttcgacaactatgattgttaaacctggt
cctgttatcgattttcttcttgccaaccagaaagttgatcaccctgacagaattgattgg
caaaaggccaagcgtgctctcaagaacttgaggataagaaccacccctgtgaattcagaa
ttcaagatcattggtttgagtgacagaaattgcaacgaacagatgttttcgttgaggcag
aggaatgggaacaatggggatgttgatgaagttgaagttacagtctatgattactttgtg
aaaaacaaaggcatagagctgcgctattctggcaatcttccttgcataaatgtggggaaa
ccaaagcgtccaacttattttccaatagagctatgctctcttattccactacaaagatac
accaaagctttgtcaacactgcaaaggtcctcccttgttgagaaatccagacagaagccc
caggaaagaatgtcagtccttaatgatgcacttcgacatagtaattatgattctgatccc
atgttgagggcatctggcatttcaattgcccaaaattttactcaagttgaaggaagggtc
ctgcaacccccaaagctgaaagctggcaatggtgaagatatattcccacgcaatggtcgg
tggaacttcaacaataagaaactgattcagacctgttctgtcgataagtgggcagtagtt
aatttctctgcacgctgtgatgtgcgaaatcttatccgggacctcataagaaatgcatct
gcgaaggggattcaaatggccgaaccttttgatgtgtttgaagagagcccctcattgagg
cgagcacctgtatcaagaagagtagatgatatgtttgaacagataaaatcgaaacttcct
ggagctccgaaattcctcttgtgccttcttcctgagaggaaaaattgtgaagtttatggt
ccttggaagaggaagtgtcttgctgaattcggtattgtcacacaatgccttgctccacaa
agagtcaatgatcagtacctactcaatttgctattgaagataaatgccaagcttggtgga
ataaactcattgctgcaaattgaagcatccccttcaatacctcttgtatcgaagacacct
accatcatcttaggtatggatgtgtcacacggtcaaccaggacaatctgatagaccttcc
attgctgcggtggttagctctcgccaatggcctctcatctctaaatacagagcatcggtg
cacactcagtcacctaagctagaaatgatgtcttccttgtttaagccacgaggaactgaa
gatgatggcctcattcgggaatcgctgattgacttctacactagttctggaaaacggaaa
ccggatcatgttatcgttttcagggatggagttagtgaaagccagtttactcaggtcatt
aacattgagcttgatcagatcattgaggcatgcaaatttctcgatgagaagtggtcacca
aagttcacagtgattgttgctcagaagaatcatcataccaaattttttcagtctggatct
ccagataatgttccgccaggtactgttgtggacaaacaagtgtgccatccaaggaattat
gacttctacatgtgtgctcatgctggaatgattggaacgacgaggccaacacattatcat
gttctgcacgatgagataggtttctcccctgatgatctgcaggagctagtgcactcactc
tcttatgtgtatcagagaagcacaacagccatatcagttgttgctccgatttgctatgcc
catcttgctgctgctcaggtgggcacattcctcaagttcgaagatatgtcggacgcgtcg
tccagccaaggaggtcatacgtctgtcggaagtgtaccggtgcctgagctgcctcgcctc
catgagaaagtgaggagctccatgtttttctgctga

DBGET integrated database retrieval system