Entry |
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Symbol |
CPS4, CYC1, OsCPS4, OsCPSsyn, OsCyc1
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Name |
(RefSeq) syn-copalyl diphosphate synthase, chloroplastic isoform 1
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KO |
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Organism |
osa Oryza sativa japonica (Japanese rice)
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Pathway |
osa01110 | Biosynthesis of secondary metabolites |
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Brite |
KEGG Orthology (KO) [BR:osa00001]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
4335090 (CPS4)
Enzymes [BR:osa01000]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.14 syn-copalyl-diphosphate synthase
4335090 (CPS4)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
4:join(5410780..5410912,5411396..5411481,5411634..5411937,5412827..5413010,5413632..5413846,5414447..5414567,5414693..5414805,5415654..5415886,5416548..5416663,5416780..5416878,5417343..5417522,5417647..5417734,5417830..5418039,5418430..5418651)
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AA seq |
767 aa
MPVFTASFQCVTLFGQPASAADAQPLLQGQRPFLHLHARRRRPCGPMLISKSPPYPASEE
TREWEADGQHEHTDELRETTTTMIDGIRTALRSIGEGEISISAYDTSLVALLKRLDGGDG
PQFPSTIDWIVQNQLPDGSWGDASFFMMGDRIMSTLACVVALKSWNIHTDKCERGLLFIQ
ENMWRLAHEEEDWMLVGFEIALPSLLDMAKDLDLDIPYDEPALKAIYAERERKLAKIPRD
VLHSMPTTLLHSLEGMVDLDWEKLLKLRCLDGSFHCSPASTATAFQQTGDQKCFEYLDGI
VKKFNGGVPCIYPLDVYERLWAVDRLTRLGISRHFTSEIEDCLDYIFRNWTPDGLAHTKN
CPVKDIDDTAMGFRLLRLYGYQVDPCVLKKFEKDGKFFCLHGESNPSSVTPMYNTYRASQ
LKFPGDDGVLGRAEVFCRSFLQDRRGSNRMKDKWAIAKDIPGEVEYAMDYPWKASLPRIE
TRLYLDQYGGSGDVWIGKVLHRMTLFCNDLYLKAAKADFSNFQKECRVELNGLRRWYLRS
NLEKFGGTDPQTTLMTSYFLASANIFEANRAAERLGWARVALLADAVSSHFRRIGGPKNS
TSNLEELISLVPFDDAYSGSLREAWKQWLMAWTAKESSQESIEGDTAILLVRAIEIFGGR
HVLTGQRPDLWEYSQLEQLTSSICCKLSRRVLAQENGESTEKVEEIDQQVDLEMQELTRR
VLQGCSAINRLTRETFLHVVKSFCYVAYCSPETIDSHIDKVIFQDVI |
NT seq |
2304 nt +upstreamnt +downstreamnt
atgccggtcttcactgcatcattccagtgtgtcaccttgtttgggcagccagcatcggcg
gccgacgcccagccattgctgcaagggcaacggccgttcctacaccttcacgctcgccgc
cgtcgaccatgcgggcccatgctaataagcaaatcaccgccgtacccggcctcggaagaa
acacgcgaatgggaagcagatggacaacatgaacacacggatgaactaagagagacgacg
acaaccatgatcgatggcatcaggacagcactgagatcaatcggagagggagagattagc
atctcagcctatgacacttcgttggttgcccttctgaagaggctagatgggggtgatggt
cctcagttcccatcaaccatcgactggatcgttcagaatcagctaccggatggttcatgg
ggtgatgcctccttcttcatgatgggagaccggatcatgagcaccctcgcttgtgttgta
gcgttgaagtcatggaacatccacaccgataaatgcgagagaggtttgttgtttatccaa
gaaaatatgtggaggttggcccatgaggaagaagactggatgctagttggatttgagatt
gccttgccctcgctcctagacatggctaaggacctggatcttgacatcccttacgatgag
ccagccttgaaagcaatatatgccgagagagaaaggaagcttgccaagattccaagagac
gtgctacactctatgccaacaactttacttcatagccttgagggaatggttgacttggac
tgggaaaagctcctcaagctccggtgtctcgatgggtccttccattgctcccctgcttcg
acggctactgctttccagcaaacaggagaccagaaatgctttgaatacctcgatggaatc
gtcaaaaagttcaatggaggagttccctgtatctaccctttggatgtgtacgaacgctta
tgggccgtcgataggctgacgaggctgggcatatcaaggcacttcacaagtgaaattgag
gattgcttagactacattttcaggaactggactccagatggattagctcacacaaagaac
tgcccggtaaaggatatcgatgacacggccatgggtttccgtctcctccgactttacgga
taccaagtcgacccatgtgtgttgaagaagttcgaaaaggatggcaagttcttctgcttg
cacggggagtccaacccatcctctgtcaccccaatgtacaacacttaccgggcctcccag
ctcaaatttcctggcgatgacggtgtccttgggcgagctgaggtgttttgccgctcattc
ctccaagacaggagaggctcaaacagaatgaaggacaagtgggccatcgccaaggatatc
ccaggcgaggttgagtatgctatggactacccatggaaagcaagtttaccgcgtattgaa
acaaggttgtacttggatcaatatggaggtagtggcgatgtatggattgggaaggtcctg
cacaggatgactcttttctgcaacgacctgtacctcaaggcagctaaagctgacttcagt
aatttccagaaagaatgccgagttgagttgaatggccttagaaggtggtacttgaggagt
aatctggagaagtttggagggactgatccacagactacactgatgacatcctacttctta
gcttcagccaacatcttcgaggcaaaccgagcagcggaacgtcttggatgggctcgcgta
gcgttgcttgccgatgccgtctcctctcacttcaggagaatcgggggaccaaaaaattcg
accagcaatcttgaagagcttatcagccttgttccttttgacgacgcttattctggcagt
cttcgtgaagcttggaagcagtggttgatggcatggactgcaaaggagagcagccaggag
tcaattgaaggggacacggcaatattgttggttcgtgccatcgagatttttggaggacgg
catgttttgaccgggcaaagaccggacctttgggagtattcccagctcgagcagctcacc
tcctccatctgctgcaaactttccaggagggttcttgcccaggagaatggggaaagtacg
gagaaagttgaggagatagaccagcaagtggatttggagatgcaggaattgactcggcgc
gttctacagggctgcagcgctattaacagactaacccgggagacgtttctccatgtggtg
aagagcttctgctatgtcgcctactgctcacctgagacaattgatagccacatcgacaag
gtcatattccaagatgtgatttag |