KEGG   Oryza sativa japonica (Japanese rice): 4335338
Entry
4335338           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein
  KO
K03267  peptide chain release factor subunit 3
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    4335338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:osa03019]
    4335338
   03012 Translation factors [BR:osa03012]
    4335338
Messenger RNA biogenesis [BR:osa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     4335338
Translation factors [BR:osa03012]
 Eukaryotic type
  Release factors
   4335338
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 G-alpha EF-G_D2 Tub_N
Other DBs
NCBI-GeneID: 4335338
NCBI-ProteinID: XP_015636637
UniProt: B9FE55
LinkDB
Position
4:join(11507016..11507223,11508434..11508484,11508831..11508917,11510906..11511017,11511709..11511754,11512031..11512102,11514727..11514789,11514885..11515039,11515150..11515214,11516492..11516642,11517077..11517182,11517287..11517422,11518157..11518221,11518850..11519035,11519145..11519217,11520183..11520250)
AA seq 547 aa
MEHDAHAPPPAAQELGDASASASVVDDWARDEDTEPMAVDPHHAAAAAATATEDGEGVAD
AAPPAAPAEDVTEIQSSLQSLELKTNAAAHEDAQEVVEEEKETKRHLNVVFIGHVDAGKS
TAGGQILFLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERLKGKTVEVGRAHFE
TETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYEKGGQTREHVLLAK
TLGVAKLIVVINKMDEPTVKWSKERYDEIESKMVPFLRSSGYNVKKDVHFLPISGLLGSN
MKTRMDKSICSWWDGPCLFEVLDCIEVPLRDPKGPVRMPIIDKYKDMGTVVMGKIESGTI
REGDSLLVMPNKTNVKVIGISLDEHKVRRAGPAENVRVKLSGIEDEDIMAGFVLSSIGNP
VGAVTEFNAQLQILELLDNAIFTAGYKAVLHIHSVVEECEIVDLIEEIDMKKKKEADPKK
KKPKRKPLFVKNGAVVVCRIQVNNLICIENFSDFPQLGRFTLRTEGKTVAVGKVVAIPPA
GSPTFSA
NT seq 1644 nt   +upstreamnt  +downstreamnt
atggagcacgacgcgcacgccccgccgcctgccgcgcaggagctcggcgacgcctccgcc
tccgcctccgtcgtcgacgactgggcgcgcgacgaggacaccgagccgatggccgtggat
ccccaccacgccgccgccgccgccgccaccgccactgaggacggcgagggcgtggcggat
gccgctcctcccgcggccccggctgaagatgttacagaaattcaatcatcactacagtcc
ttggagttgaagacgaatgctgctgcacatgaggatgctcaagaggtagtagaggaggaa
aaggaaacaaagcggcatttgaatgtggttttcattggtcatgttgatgctggaaaatca
actgccggagggcaaatacttttcttgagtggtcaagtcgatgacaggaccatccagaag
tatgaaaaagaagcaaaagataaaagccgagaaagctggtacatggcttacattatggac
acaaatgaggaagagcggctaaaggggaaaactgttgaagttggtagagcccactttgag
acagaaactacaagattcactattttggatgcaccgggtcataaaagttatgttccaaat
atgataagtggtgcatctcaagcagacatcggtgttctggttatatctgcccgaaaaggt
gaatttgaaactggttacgaaaaaggaggacagactcgtgaacatgtactgcttgcaaaa
actttaggtgttgctaagttgatagttgtcatcaataagatggatgaaccaactgtaaaa
tggtctaaagaaaggtatgatgaaattgagtcaaagatggttccttttctcagatcttca
gggtacaatgtcaaaaaagatgttcactttttgccaatatctggtcttttgggaagcaat
atgaagaccaggatggataaaagcatttgtagttggtgggatggtccatgtctttttgaa
gtcctggattgtattgaagttcctttgcgtgaccccaaaggtccagtcaggatgccaata
attgataagtataaagatatgggcactgtagtgatgggaaaaatagaatctgggaccatc
agagagggtgacagtttgttggtcatgccaaacaagactaacgtgaaagtcattggcata
agtttggatgagcacaaggtacgccgtgctggacccgctgagaatgtccgtgtcaaattg
tctgggattgaagacgaggatattatggctggttttgtgctctcaagcattggtaatcct
gttggtgctgtcactgaatttaatgctcagttgcagattctagagttgcttgacaatgct
attttcacagctggctacaaggcagtgttgcatatccactctgttgttgaagagtgtgag
attgttgatcttatagaggaaattgatatgaagaaaaagaaagaagctgatccaaagaag
aaaaaaccaaagcggaagcctctttttgtgaagaatggtgcggttgtagtttgccgcatt
caggtgaataatttgatttgtatagagaacttctctgattttcctcagcttggaaggttt
acacttcgaacagaaggtaagacggtggctgtagggaaggttgttgctattccaccagct
ggcagcccaacattttcagcttaa

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