KEGG   Oryza sativa japonica (Japanese rice): 4335508
Entry
4335508           CDS       T01015                                 
Name
(RefSeq) importin beta-like SAD2 isoform X1
  KO
K20223  importin-7
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    4335508
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4335508
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    4335508
  Pre-60S particles
    4335508
SSDB
Motif
Pfam: IBN_N TPR_IPO11 Cse1 HEAT_IPO9_c Xpo1 TARBP1
Other DBs
NCBI-GeneID: 4335508
NCBI-ProteinID: XP_015636304
LinkDB
Position
4:join(16212401..16212490,16214300..16214435,16214505..16214592,16215366..16215518,16215906..16216068,16216138..16216322,16216388..16216561,16216914..16217059,16217190..16217313,16217394..16217574,16218678..16218837,16218927..16218968,16219041..16219159,16219240..16219438,16219955..16220086,16221238..16221341,16221442..16221621,16224876..16225015,16225112..16225251,16225454..16225605,16226465..16226594,16226682..16226833)
AA seq 1029 aa
MDLQSLAVVLRAALSHVPEERKAAEASLTQFQYTPQHLVRLLQIIVDGNCDMAVRQFASI
HFKNFVAKNWSPTDPEEKHIIPESDKSMVRENILGFVTQLPPLLRAQLGESIKTLILADY
PEQWPSLLPWVTHNLESQDQIFGALYVLRILARKYEFKSEDERIPLYQIVEECFPRLLNI
LRNLVPISNPPIEVADLIKLICKIFWSSIYLEIPKQLFDPNVFNTWMILFLNLLERPVPV
EGQPLDPDARKSWGWWKVKKWIIHILNRLYTRFADMKLQRPESKAFAQMFQKNYAGKILG
CHLQLLNAIRTGGYLPDRVINLILQYLTNSVTKNSMYQLMQPQIDIILFEIIFPLMCFND
SDQMLWDEDPHEYVRKGYDIIEDLYSPRTAAMDFVSELVRKRGKSNLQKFIHFIVEIFMR
YNEASIEVKPYRQKDGALLAIGTLCDRLKQTEPYKAELERMLVQHVFPEFSSHVGHLRAK
AAWVAGQYAHINFSDQNNFRKAMHCVISGLRDPELPVRVDSVFALRSFVEACKDLDEIRP
ILPQLLDEFFKLMSEVENEDLVFTLETIVDKFGEEMAPYALGLCQSLAAAFWRCMASSEA
DEEVEDTGALAAVGCLRAISTILESISSLPHLFPQIEPTLLPILRRMLTSDGQDVYEEVL
EIVSYMTFYSPTISLEMWGLWPLMMEALNDWAIDFFENILVPLDNYISRGTDQFIACKDP
DYQQSLWRALSSIMTDQNMEDSDIIPAPKLIEVVFQNCKGQVDHWIEPYLRLTIDWLRRA
VKPYLKSLLVQVIANTLYYNPSLTLGTLHKLGVATEIFNLWFGMLQQVKKSGIRANFKRE
HDKKVCCLGLTSLISLPANHIPPEALERIFKATLELLVSYKDQVAESKWENEAAAEDLDG
FDGDEEDEDIESDKEMGYDDEDGDEVSSVNLQKLREARGFQPHYDDDDDDSDDDFSDDEE
LQSPIDEVDPFIFFVDTIQGMQASDPARFQSLMQTLDFRYQALANGLAQHAEERKVEIEK
EKLEKANAQ
NT seq 3090 nt   +upstreamnt  +downstreamnt
atggatctgcagagcctggccgtggtgctgcgcgcggcgctcagccacgtccccgaggag
cgcaaggccgccgaggccagcctaacccagtttcagtacacaccacaacacttggttaga
ttgctacagattattgtggatggaaattgtgatatggctgttagacagttcgcaagcatt
catttcaagaattttgttgcgaagaattggtcacctactgatcctgaagaaaaacatata
attccagaaagtgacaagtccatggtccgtgagaatatattgggttttgttactcaatta
cctccattgctaagagcccagcttggagaaagtatcaagaccttgatccttgcagattat
cctgagcagtggcctagtcttcttccttgggtaacacataatctagaatcacaggatcaa
atatttggagcactatatgtgctaaggattcttgcccggaaatatgagttcaagtcagag
gacgagaggatacctttgtatcaaattgttgaggaatgctttcctcgtttgttgaatata
ttaagaaatcttgttccgatttccaaccctccaattgaagtagctgacttgatcaagctg
atatgcaaaattttctggtcatccatttatctagaaattccaaagcaactttttgatcca
aatgtcttcaatacttggatgattttgttcttaaacttactggagcgaccagttccagtg
gaaggacaaccattggatcctgatgcgaggaaatcttggggatggtggaaagtcaagaaa
tggattatccatatattgaaccgtttatacactcggtttgctgatatgaagcttcagaga
ccagaaagcaaagcctttgctcaaatgttccaaaagaactatgctggaaaaattttgggg
tgccatttgcagttgctcaatgcaatacgtactggtggctatttgcctgatagggttatc
aatcttattcttcaatatcttaccaacagtgtcacgaagaacagcatgtatcagcttatg
caaccacaaattgacataattctatttgagataatcttcccattaatgtgcttcaatgat
agtgaccagatgttgtgggatgaagatcctcatgaatatgttcggaaaggctatgatatt
attgaagatttgtatagtcctcgaacagctgctatggactttgtgagtgaattggtaaga
aaacgagggaaaagcaatctgcaaaagtttatccattttattgtggaaatatttatgagg
tataatgaggcatccattgaagtgaagccataccgccaaaaggatggtgcgcttcttgca
attgggacattgtgtgataggctaaaacaaactgaaccatataaggctgagctggagcga
atgttggttcaacatgtctttccggagttcagtagtcatgttggacacttacgtgcaaag
gcagcatgggttgctgggcagtatgctcatatcaatttctcagatcaaaacaattttcgc
aaagctatgcattgtgtaatctctggtttgcgtgatccagaacttcctgttagggtggat
tcagtctttgcactccgttcttttgttgaagcatgcaaagatctagatgagatccgacca
attcttcctcaactacttgatgaattttttaagcttatgagtgaagttgagaatgaagat
ctcgttttcacccttgagacaattgttgacaaatttggtgaagagatggcaccatatgca
cttggtttgtgccagagtttggctgctgctttctggagatgcatggctagttcagaagct
gacgaagaagttgaggacactggtgctttggctgctgttggttgcttacgtgcgataagc
acaatccttgagtccattagtagccttcctcatttgtttccccaaatagagccgactttg
ttgcctattttacgaagaatgttgacttcagatggtcaagatgtgtatgaagaagttctg
gagatagtctcctatatgacattttactcaccaaccatttcactggaaatgtggggcttg
tggcctttgatgatggaggcccttaatgattgggccattgatttctttgagaatattctg
gtaccattagacaactacatttcccgtggcactgatcaatttattgcatgcaaagatcct
gattatcagcaaagcctatggagagcactgtcatctattatgacagaccaaaacatggaa
gattctgacattatacctgctcccaagctgattgaagtcgtttttcaaaattgcaaaggt
caagtcgatcattggattgagccgtatctcaggctaacaattgattggctgcgtcgtgca
gtgaagccgtatctgaaaagcttacttgtacaagtgatagctaatacactgtactacaat
ccttcattgacattgggaacattgcataagcttggagttgctactgaaatcttcaatctt
tggtttggcatgttacagcaagtaaagaaaagtggcataagggcaaactttaagagagaa
catgataagaaggtttgttgcttgggattgacttcactaattagccttccagctaatcac
attccaccagaagctcttgagcgcattttcaaagcaacactagagcttcttgtttcttac
aaggatcaagttgcagaatctaaatgggaaaatgaggctgcagctgaagatttggatgga
tttgatggtgatgaagaagatgaggatattgagtctgataaggagatgggatatgatgat
gaggatggggatgaagtatctagtgtcaatcttcagaaactaagagaggcaagaggtttc
cagccgcactatgatgacgacgatgatgattctgatgatgactttagcgatgatgaggag
ttgcaatcgccaattgatgaggtggacccattcatcttctttgttgataccatccaaggt
atgcaagcatctgatccagccaggttccagagcctgatgcagactctagatttccgctac
caggcactcgcgaatggcttagctcaacatgccgaggaaagaaaagttgaaattgagaaa
gagaagttggaaaaggcgaatgcgcagtga

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