KEGG T01015: 4335542

Oryza sativa japonica (Japanese rice): 4335542

Entry

4335542           CDS       T01015

Name

(RefSeq) cell division cycle 5-like protein

K12860

pre-mRNA-splicing factor CDC5/CEF1

Organism

osa Oryza sativa japonica (Japanese rice)

Pathway

osa03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    4335542
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:osa03041]
    4335542
   03400 DNA repair and recombination proteins [BR:osa03400]
    4335542
Spliceosome [BR:osa03041]
Complex B
  Other components
   Prp19 complex
    4335542
Complex C
   Prp19-CDC5 complex
    4335542
DNA repair and recombination proteins [BR:osa03400]
Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    4335542

SSDB

Motif

Pfam:

Myb_Cef Myb_DNA-binding Myb_DNA-bind_6

Other DBs

NCBI-GeneID:

4335542

NCBI-ProteinID:

XP_015636290

UniProt:

A0A0P0W9C3

LinkDB

Position

4:join(16927123..16927299,16929161..16930882,16932458..16932739,16933039..16933776)

AA seq 972 aa
MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKT
EWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACAKDENYEPNDDPR
KLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTRGKKAKRKAREKQLEEARR
LASLQKRRELKAAGIDTRQRKRKRKGIDYNAEIPFEKRPPPGFYDTVGEDRPLEHVQFPT
TIEELEGKRRVDIEAQLRKQDIARNKILQRQDAPAAIMQANRLNDPEAVTKRSKLMLPPP
QISDHELEEIAKMGNAGDPSLVEELGEGSTATRALLSSYSQTPRLGMTPLRTPQRTPAGK
GDAIMMEAENLARLRESQTPLLGGDNPELHPSDFSGVTPRKKEMQTPNPMATPLASPGPG
ATPRIGMTPSRDGSSFGLTPKSTPFRDELRINEEVDMQDTAKLELRRQAELRKSLRSGFA
SIPQPKNEYQIVMPPITEEEKEEAEEKIEDMSDRLARERAEEQARQEALLRKRSKVLQRS
LPRPPAASIEILRQTLIKGGESRSRSTFVPPTSLEQADELINEELLRLLEHDNAKYPLDE
KTQKDKKKGSKRQANGTPSVPEIEDFDEDELKEANSMLEEEVQYLRVAMGHESESLEDFV
KAHDACQEDLMFFPNNNSYGLASVAGNSDKIAALQYEFEIVKKRMDDEAKKASRLEQKIK
LLTQGYQVRAGKLWSQVQDTFKQMDTSATELECFQELQKQEQMAASYRIRNLTEEVNKQK
ALERTLQSRYGDLLTSYKRIQEQLEEHKRQLMIQEEMEAQKRAQEEEEMEAQKRTQAEEE
KEAAKAEEEARKMDRAADEEAAGSKQVNEDQMDVDNSNADGDEFVGPIPPGPGTQGDDNV
VAVEENSSSQSGDTATTEDGSCGMIDASKSGGQDHIDSKDELPTVGASLDDGSAAASSDQ
DVSTEVNATVPE

NT seq 2919 nt +upstreamnt +downstreamnt
atgaggatcatgataaagggcggggtgtggaagaacacggaggacgagatcctcaaggcc
gccgtgatgaagtacggcaagaaccagtgggcgcgcatctcgtccctcctcgtccgcaag
tccgccaagcagtgcaaggcccgctggtacgagtggctcgacccctccatcaagaagact
gaatggacaagggaagaggatgagaagttactgcatcttgctaaactcatgcctacgcag
tggaggacaattgcacctattgttggtcgaacaccatctcagtgccttgagcgttatgag
aaacttcttgatgctgcctgtgcaaaggatgagaattatgagcctaatgatgatccaagg
aagttacggcctggtgagattgacccgaaccccgagtcaaaacctgcacgtcctgatcct
gttgatatggatgaagatgaaaaggagatgctttctgaggcaagggctcgcttagctaac
accaggggtaaaaaggcaaagcggaaggcaagagagaaacaacttgaagaggcaaggcga
cttgcctcactgcagaaaaggagagaattaaaggcggctggtattgatacacggcagagg
aagagaaagagaaagggtatcgattataatgctgagattccttttgaaaagaggccgcct
ccaggtttttatgatactgttggtgaggacaggccacttgagcatgtacagttcccaacc
actattgaggagcttgaaggtaagagaagagtagacatagaggcacaattaagaaaacaa
gacattgccaggaacaagattctccagaggcaggatgctcctgctgcaattatgcaggca
aatagactcaacgatccagaagctgtcacaaagaggtccaaattaatgcttccaccaccc
caaatctctgatcatgagctagaagagatagcaaagatgggtaatgctggtgatccttct
ttagttgaggaacttggcgaaggtagtactgccacaagagcattgctttctagttattcc
caaactccaagacttggaatgacaccattgcggacgccacaacgaactccagctgggaag
ggtgatgctattatgatggaggcagaaaatctagcgcgtctaagggagtctcagacccct
cttttaggaggggataacccggagcttcacccatcagatttctctggtgttacaccacgt
aagaaggaaatgcagactccaaatccaatggcaacacctttggcaagccctggccctggt
gctactccaagaattggaatgacaccctccagagatggaagttcttttggtttaactcca
aaaagtactcctttccgagatgagcttcgcataaatgaagaggtggatatgcaagatact
gctaaacttgagcttcgtaggcaagctgaattgagaaaaagcctacgatctgggtttgct
tctattccacagcctaagaatgagtaccagatagttatgccacctatcacggaggaggag
aaggaagaagctgaagagaaaattgaggatatgtcagacaggcttgcacgagagagggct
gaggaacaagcaaggcaggaagccttgctcagaaagagatccaaagttttgcagaggagc
ttgccaaggccaccggcagcttctatagaaattctccgacaaactctaattaagggtggt
gaaagcagaagcaggagcaccttcgtgcctcctacatcacttgaacaagctgacgaacta
ataaatgaggagcttcttcggctccttgagcatgataatgctaaatatcctctagatgag
aaaactcaaaaggataaaaagaaaggaagcaagcgccaggcgaatgggactccttctgta
cctgagattgaagattttgatgaagacgaattaaaagaggccaattctatgcttgaggag
gaggttcaataccttcgtgtcgccatgggacatgaaagtgaatctttggaagattttgtg
aaagcacatgatgcatgccaagaggaccttatgttttttccaaataacaacagctatggt
cttgccagcgttgctggaaattctgataagatagctgctttgcaatatgagtttgaaatt
gtgaagaagagaatggatgatgaagctaagaaggcttcgcggcttgagcagaaaatcaag
cttctgacacaaggataccaggtacgagctggtaaactctggtcacaggttcaagataca
ttcaagcagatggacacttcagcaacagagcttgaatgctttcaagagctgcagaagcag
gaacagatggctgcatcttatcgtataagaaatttgactgaagaagtaaacaaacagaaa
gcattagaacggactctccaaagccgctatggtgatctgttaactagttacaagaggatc
caagagcagcttgaggagcataagaggcaactgatgatacaggaggaaatggaagcacag
aagcgtgctcaggaggaggaggaaatggaagcacagaagcgtacgcaggcagaggaagaa
aaagaagcggcgaaagctgaagaggaagcaagaaagatggatagggctgctgatgaagaa
gcggcaggaagcaaacaagtcaatgaggatcagatggatgttgacaactctaatgctgat
ggtgatgaattcgtaggtccgattcccccaggaccaggtactcaaggtgacgacaatgtg
gtggcggtcgaagagaactctagctcgcagagcggtgatactgctaccacggaagatgga
tcttgtggcatgatcgacgcatcaaaatcaggaggtcaggatcacatcgacagcaaggat
gaacttcccactgttggtgccagtctagatgatggaagtgctgctgcatcttctgatcaa
gatgtctcaactgaggtgaatgccactgtccctgaatag

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