Oryza sativa japonica (Japanese rice) (RefSeq): 4335713
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Entry
4335713 CDS
T01015
Name
(RefSeq) WASH complex subunit strumpellin homolog isoform X1
KO
K18464
WASH complex subunit strumpellin
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
4335713
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4335713
Membrane trafficking [BR:
osa04131
]
Protein recycling
Others
WASH complex
4335713
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Strumpellin
Motif
Other DBs
NCBI-GeneID:
4335713
NCBI-ProteinID:
XP_015635696
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All DBs
Position
4:complement(19695371..19709969)
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AA seq
1146 aa
AA seq
DB search
MAEAGPSRPAAAAAVAAGDFPELLAFCARAEALIAELLLLSDRAPSQFADRRFHPVLFDF
RYFDSPGEFEARIEGNMELEALEDELRESCGSYMRRFFALLDAAVAYHDELCSYLNDLQE
GLYVHCTLDGVLESNWACQLLTESMTLFGCMALLMEHRISGLLRERLLVAYLRHERCFSF
PNVERICKLCRRHVTTPPSPGASGSSLHTVEIISVQKPEDLLRRFQFPELIVDAVITCLR
NGDVYNNVRFYPDPQHRTTALSLQGGHMYVLLFYSRDLLHNGLAMREIVDRFFKDNWVVP
IFLHFSVDLLVSWDAFKEAKSSLVSCLSPTFVRDRSLYHYTKVSSLLADLDSHMHAVNKE
YVLDNSLNLLSIIRECNCTLRWLLLHRMTNDKKARDLVICLGSSQHADEGKLLQLLMKTA
KLEFEVKELHAELLKTRKSMWYEKRHDALECMKDLSQNYLGTWAASCKLKNKSIKDWLEH
LSSEVSSLDYATIGNSGRIIHRVLSTLKDIELLHQIKENIQIKHGFSKIQKNLHDMIKVL
NLNQESISVFSVITDGKYAWGYLTYFEELLKKKISQDPSESLFLHTMFLKFQSWLDAPLQ
RIKQYESPDLQYVSTYYASKYAAKIFAVLDIIPAILLKISIDVDYINAEQSTHLINRINK
ETLEDLMQLDQQLCQAQQAAKLCIVSEGLLNMSKNFDGLIDLNLGGWLKQMIKKELVSQL
QGKLKALSLLIYGDIEGNLMSLSNYMLSQMQRMEFLQHILHIDGCSIWEETLTAVLEECA
KREVLEFMGCMQPSTNMVKPSNHMSNPGTFFGHLLQYIVHLTDPSRSMFIEAMMGWFDAG
GNELLGMRFFHLLESCVGQVGLACLDSLIHVLVKQSVEHAMKDLHTLVDVKCREELNKLD
DLLGPPMSIPLMGWSSYKEMVKMLHSSWGPLVEKLATIGQLQLVRNLVSFKLRSACKVRA
NTISSAVDILSSSVCLQNGRFETGAEDHNVRLFLNNIKDQQNFCGLLSPLQAIYISEEPP
MFLTRLLCIFSISQLPKYVLDIHLGNLTNPLKKSVADFSALVIGLGTLLQQFGPSHITQY
IEFMIQYIRMAEAAFNPTPVTNKGSAHSSEAPKALYWVMSFCKYMDISMDLVESCLPSSS
LAILQS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggggcccagccggccggccgccgccgccgccgtcgccgccggcgacttc
ccggagctcctcgccttctgcgcccgcgcggaggccctcatcgccgagctcctcctcctc
tccgaccgcgccccgtcgcagttcgccgaccgccgcttccaccccgtcctcttcgacttc
cgatacttcgactccccgggcgaattcgaggcgaggatcgaggggaacatggagctggag
gccctggaagacgagctccgcgagtcctgcggctcctacatgcggaggttcttcgccttg
ctggatgccgccgtcgcttaccacgacgagctgtgcagctacctcaacgacctgcaggaa
gggctgtatgtgcattgcacattggatggtgtactggagagtaactgggcttgccaattg
cttacagaatcgatgactttgtttgggtgtatggctttgctaatggagcacaggattagc
ggattgctgcgtgagagacttctggtggcgtatctgcggcacgagcgttgcttcagcttc
cctaatgtggagcgcatatgcaagctctgtcgtcggcacgtgactacacctccttcgcct
ggtgcctccggttcatcgttgcatactgtggaaatcatctctgtacagaagcctgaggat
ctgcttaggaggtttcagtttcctgagctcattgtggatgctgtcataacttgcttgaga
aatggtgatgtttacaacaatgtccggttctaccctgatccgcagcaccggacaaccgct
ctctcattgcaaggtggacacatgtatgtgttgttattttattctcgtgaccttctacac
aacggtttggctatgcgggagattgttgatcgcttctttaaggacaactgggtggttccc
atcttcttgcatttctcggtagatttacttgtctcatgggatgcattcaaagaagcgaaa
tcatcattagtttcttgcctttctcccaccttcgtacgtgatcgcagtctataccactat
acaaaggtatcttctcttctagctgacctggatagtcatatgcatgcggtaaacaaggaa
tatgttctggataattctctgaatcttctttctatcatcagagagtgcaattgcacactg
cgttggcttttgcttcaccgcatgacaaatgataagaaggcaagggacctagtgatctgt
ttagggtcatcacaacatgctgacgaagggaagctgttacagctcctgatgaagactgct
aaacttgagtttgaggtgaaggaactgcatgctgaactattgaaaaccagaaaaagtatg
tggtatgagaagaggcatgatgctttggaatgtatgaaggacctgtctcagaactatctt
gggacttgggctgcgtcatgcaaattaaaaaacaagagcatcaaagactggttggagcac
ctgtcatcagaggttagctccctggattatgccacaattggaaactccggcaggataatt
catcgtgtgctatctacgctaaaagatattgagctacttcaccaaatcaaagagaatata
cagataaagcatggcttctccaaaatacagaagaatcttcatgatatgataaaagttcta
aacctaaaccaagagtccataagtgttttctcagtgattactgatggtaagtatgcatgg
ggttatcttacttattttgaggaacttcttaagaagaagatcagtcaagatccatcagag
tctttatttttgcatacgatgtttcttaaatttcaatcatggttggatgcaccgctgcag
aggatcaagcagtatgaaagtccagatcttcagtatgtctcaacctactatgcttcaaag
tatgcagctaaaatatttgcagttctagatattatcccggctatattgcttaaaatttct
attgatgtggattacatcaatgctgaacagtccactcatctaataaatcgcatcaacaag
gaaacattggaagatctcatgcagttggatcaacaactatgccaagcacagcaggctgcc
aaactatgcattgtttcagagggccttttgaacatgtcaaagaactttgatggccttata
gatctgaatttaggtggatggcttaagcaaatgataaaaaaggagttagtaagccaacta
caaggcaagctgaaagccttatcattgctcatttatggtgatatagaaggcaatctcatg
tcattgtcaaattatatgctttcacagatgcagagaatggaattcctacagcacatactg
cacattgacgggtgttcaatctgggaagaaacattgactgctgtgctagaagaatgtgct
aaaagggaggtcttagagtttatgggatgcatgcaaccatccactaatatggtgaaacca
tcgaatcatatgtccaatccgggcactttttttggtcacctgctgcaatatatagttcat
ttaacggatccatcgcgctccatgtttatagaggctatgatgggttggtttgatgcagga
ggaaatgaattgcttggtatgcgcttctttcatttgctggaatcatgtgtgggacaagtt
ggattagcttgcttggattccttaatacatgtactagtaaagcagagtgtggagcatgca
atgaaagatttacatacattggttgatgttaaatgtcgagaggaattgaataagctggat
gatctactggggcctcccatgtccattcctctgatgggttggtcatcatataaggaaatg
gtgaagatgttgcattcatcatggggaccactggttgagaaattagcaacaatcggacag
ctgcaattggttcgaaatctcgtgtcctttaaattgagatcagcatgcaaggtcagagca
aacactataagctcggctgtggacattttgtcatcttcagtttgtttgcagaatgggagg
tttgagacaggggccgaggatcacaatgtcagactcttccttaacaatataaaggatcag
cagaacttttgcggcttactttcacctcttcaggctatctatatttctgaagagcctcca
atgttcttgaccagattgctgtgcatcttttccatatcgcagttaccaaaatatgttctt
gacattcacttgggcaatttgaccaatccactaaagaaatctgtagctgatttctctgct
ctggtcatagggcttggtacacttctgcagcagtttggtccttcccatataacccagtat
attgagtttatgattcaatatatacggatggcagaagcagcatttaatcccacacctgtt
acaaacaagggatctgctcattcctctgaggcaccaaaggcgttatattgggtgatgtcc
ttctgcaagtacatggatatctccatggatttagtcgagtcatgcttaccatcttcctct
ctggctatcctgcaatcctga
DBGET
integrated database retrieval system
