Oryza sativa japonica (Japanese rice): 4335732
Help
Entry
4335732 CDS
T01015
Name
(RefSeq) calnexin homolog
KO
K08054
calnexin
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04141
Protein processing in endoplasmic reticulum
osa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
4335732
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
4335732
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
osa03110
]
4335732
04131 Membrane trafficking [BR:
osa04131
]
4335732
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
osa04091
]
4335732
Chaperones and folding catalysts [BR:
osa03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
4335732
Membrane trafficking [BR:
osa04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
4335732
Autophagy
ER-phagy
Other ER-phagy associated proteins
4335732
Lectins [BR:
osa04091
]
L-type lectins
4335732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
Motif
Other DBs
NCBI-GeneID:
4335732
NCBI-ProteinID:
XP_015635438
UniProt:
A0A0P0W9P9
Q7XV86
LinkDB
All DBs
Position
4:complement(join(20281358..20281507,20281598..20281714,20281831..20281902,20282014..20283143,20284089..20284158,20284275..20284349))
Genome browser
AA seq
537 aa
AA seq
DB search
MVGGRALLPLLLLSALLVQIRASDPLFYEPFDESFEGRWVLSGKDDYKGVWKHEKSDGHE
DYGLLVSEKAKKYAIIKELDEPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWD
AKEFDNETPYTIMFGPDKCGSTNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYT
AILKPDNEVRILVDGEEKKKANFLSADDFEPSLIPSKTIPDPDDKKPEDWDERAKIPDPD
AVKPDDWDEDAPMEIEDEEATKPEGWLDDEPEEIDDPEANKPEDWDDEEDGEWEAPKIDN
PKCEEAPGCGEWKRPMKQNPAYKGKWHAPLIDNPNYKGIWKPQEIPNPEYFELDKPDSDP
IAAIGIEIWTMQDGILFDNILIADDEKVATSILEKSWKPKYEVEKEKEKAEEAAAAAGDG
LSEFQKKIFDVLYKLADIPFLEPYKTKIIDVIEKGEKQPNITIGILVSIVVVFVTVLFRI
LFGGKKPAAPVKPVAEVKKPKSTESEAAGSSGGKEDEKEEEEKDGAAAPRRRSRRET
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtgggcgcgcgctcctgccgctgcttctgctctccgcgctgctcgtccagatc
cgcgcctccgatccgctgttctatgagccgttcgacgagagcttcgaggggaggtgggtt
ctctccgggaaggacgactacaaaggtgtatggaagcacgaaaagagtgatggacatgaa
gactatggcctgcttgttagtgagaaggccaagaaatatgccataatcaaggagcttgat
gagcctgttactttgaaggatgggactgttgtcctgcagtttgaagtgaggcttcagaat
ggccttgagtgtggaggtgcatatcttaagtacattcgtcctcaggatgctgcatgggat
gccaaggagtttgataatgagactccttacactattatgtttggtcctgacaaatgtgga
tcaactaacaaggtgcatttcatccttaagcacaagaaccccaagactggcaagtatgtt
gaacaccacctcaagttcccaccttctgtcccatatgataagctctctcatgtctacacg
gctatcttgaagcctgataatgaggtgagaattttggttgatggggaagagaagaagaag
gcaaacttcctttctgctgatgattttgagccatcacttatcccatccaagaccattcct
gatcctgatgacaaaaagccagaagactgggatgagagagctaaaatccctgatccagat
gctgtgaagcctgatgactgggatgaggatgcccccatggaaattgaggacgaagaggcc
acaaagccagaggggtggctggatgatgagccagaggaaattgatgatccggaggctaac
aagcctgaagactgggatgatgaggaggatggagaatgggaagcaccaaagattgacaac
cccaagtgtgaagaggctcctggttgtggtgagtggaagaggccgatgaagcagaaccct
gcttacaagggcaagtggcatgcgcctcttatcgacaaccccaactacaaaggaatctgg
aagccccaagagatccccaaccctgagtacttcgagcttgacaagcctgactctgatccg
attgccgctattgggattgagatctggacgatgcaagatggcatcctgtttgacaacatt
ttgatcgctgatgatgagaaggttgccacttctatcctggagaagtcttggaagcccaag
tacgaagtagagaaggagaaggagaaggctgaggaggcagcagcggcagcaggtgatggt
ctttctgagttccagaagaagatctttgacgttctgtacaaactcgctgacattccattc
ttggaaccctacaagactaagatcattgatgtaattgagaagggagagaagcagcccaac
atcaccattggaattctggtctccatcgttgtcgtctttgtgactgtgctcttcaggatc
ctgttcggcggcaagaagccagcggctcctgtgaagcccgtagccgaggtcaaaaaacca
aagtctaccgagtccgaagcagctggaagcagcggtggcaaggaggacgagaaggaagag
gaagagaaggatggagctgctgccccacgccggaggtcccgaagggagacatga
DBGET
integrated database retrieval system
