Oryza sativa japonica (Japanese rice): 4336118
Help
Entry
4336118 CDS
T01015
Name
(RefSeq) small nuclear ribonucleoprotein SmD1a
KO
K11087
small nuclear ribonucleoprotein D1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4336118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4336118
03032 DNA replication proteins [BR:
osa03032
]
4336118
Spliceosome [BR:
osa03041
]
Complex A
U1 snRNP components
Sm proteins
4336118
U2 snRNP components
4336118
Complex B
U1 snRNP components
4336118
U4/U6.U5 tri-snRNP components
4336118
Complex C
U2 snRNP components
4336118
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
4336118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Gemin7
EBNA2_Core
BPL_C
Motif
Other DBs
NCBI-GeneID:
4336118
NCBI-ProteinID:
XP_015635423
UniProt:
A0A8I3B3K1
LinkDB
All DBs
Position
4:complement(join(23992392..23992453,23992542..23992733,23993880..23993956,23994097..23994110))
Genome browser
AA seq
114 aa
AA seq
DB search
MKLVRFLMKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEDTPRVKAKKPTAGKPLGRGRGRGRGRGRGRGR
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcaggtttctgatgaagctgaacaacgagacggtcaccatcgagctcaag
aacggcaccgtcgtccacggaaccatcaccggtgtggatataagcatgaacacccacttg
aagactgttaagctcacattgaaagggaaaaatcctgtaacccttgaccacctcagtgtg
agaggaaacaacattcgctattacatcctccctgatagcttaaatctggaaactttacta
gtagaggataccccgagagtcaaggctaagaagccaactgcagggaaacctttggggcgt
gggcgcggacgcggtcgtggccgtggtcggggccgggggcgctga
DBGET
integrated database retrieval system
