KEGG   Oryza sativa japonica (Japanese rice): 4336167
Entry
4336167           CDS       T01015                                 
Symbol
CRC1, OsJ_15194
Name
(RefSeq) pachytene checkpoint protein 2 homolog
  KO
K22399  pachytene checkpoint protein 2
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4336167 (CRC1)
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Others
     4336167 (CRC1)
SSDB
Motif
Pfam: AAA_lid_TRIP13_C AAA TRIP13_N AAA_22 AAA_16 AAA_18 nSTAND3 Cytidylate_kin AAA_14 NPHP3_N AAA_5 Viral_helicase1 NACHT AAA_30 AAA_28 RuvB_N AAA_2 RNA_helicase ATPase_2 TIP49 TsaE DUF815 AAA_17 ABC_tran AAA_11 AAA_24 AAA_33 AAA_7 bpMoxR Rad17 nSTAND1 nSTAND6 IstB_IS21 AAA_19 AAA_3 PduV-EutP SLFN-g3_helicase NB-ARC Cytidylate_kin2 KAP_NTPase SRPRB Sigma54_activat DnaB_C Mg_chelatase SKI NTPase_1 ResIII AAA_13
Other DBs
NCBI-GeneID: 4336167
NCBI-ProteinID: NP_001406501
LinkDB
Position
4:join(24451925..24452108,24452213..24452276,24452789..24452895,24452980..24453047,24453505..24453608,24453706..24453810,24453963..24454052,24454130..24454205,24454440..24454509,24454947..24455017,24455093..24455183,24455340..24455467,24455695..24455823,24455910..24456050)
AA seq 475 aa
MSAPMEVSFSAPPPPDAASAAAAAPSLVPAVSAAAVAATTVSCSPQPPTGSPSADDRILV
SVEVLLHATSTARAEDVCAAVERMLEARSLSYVDGPVPIPNDDPFLLANVKRIQICDTDE
WTENHKVLLFWQVRPVVHVFQLSEDGPGEEPGEDDTLSSFNEWALPAKEFDGLWESLLYE
VGLKQRLLRYAASALLFTEKGVDPCLVSWNRIVLLHGPPGTGKTSLCKALAQKLSIRFKS
RYSMCQLIEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARQ
AAISGSEPSDSIRVVNALLTQMDKLKSWPNVIILTTSNITTAIDIAFVDRADIKAYVGPP
TLQARYEILRSCLQELLRVGILTHTQGGNSLCLLSYFSLMENQHCPEVADPHGSVHLSGL
LHKAAEICEGLSGRTLRKLPFLAHASVANPSCCDASAFLHALIQTAQRELSESRG
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgagcgcccccatggaggtctccttctccgcgccgcctcctccggatgcggcatctgct
gccgccgcggccccatcgctggtgcccgccgtgtcggcggcggcggtggcggcgaccacc
gtttcctgctcgccgcagccaccgacggggtcgccctcggccgacgacaggatcctcgtt
tcagttgaagtgcttctgcacgccactagcacagctcgagccgaggacgtctgcgctgcg
gtggagaggatgttagaagctcgaagcttaagctatgttgatggtcctgtcccgattcct
aatgatgatccttttcttcttgcaaatgttaaaaggatccaaatctgcgacactgatgag
tggactgagaatcacaaagttctgttattttggcaagtcaggcctgttgttcatgtgttc
cagttgagcgaagatggtccaggtgaggagccgggtgaggacgatacactctctagcttc
aatgagtgggctctgcctgccaaagaatttgatgggttgtgggaaagcttactctatgaa
gttggtctcaagcagaggttgctgagatatgctgctagtgctttgctgtttactgaaaag
ggtgtagacccatgtcttgtttcctggaacaggattgtacttttgcatggtccacctgga
acaggaaagacttccttgtgtaaagcacttgctcaaaaactttccattcgcttcaagtca
aggtattccatgtgtcaattgattgaagtcaatgcccattcactgttcagcaagtggttt
tctgaaagcggaaaactggtggccaaacttttccagaagatccaggagatggtggaagaa
gaaagcaacctggtatttgtattgatagatgaagttgaaagcctagctgctgccagacag
gctgccatatctggatctgaaccttcagattccataagggttgtaaatgcattacttaca
caaatggacaaactcaagtcttggccaaatgttatcattttgacaacatcaaatatcacc
acagctattgatattgcatttgttgatagagcagacatcaaggcatacgttggaccccca
acccttcaagcacgatacgaaattttgaggtcatgcttacaggaacttttgcgagttgga
attcttacacatactcagggtggcaattctctttgccttttgagttattttagcctgatg
gagaaccagcactgtcctgaggtcgcagatcctcatggttcggttcatctctctggccta
ctccataaagctgcagaaatatgtgagggattaagcggtcgaacattgaggaaacttcct
ttcctggcacatgcttctgttgctaacccttcatgctgcgatgcctctgctttcctgcac
gctttgatacagactgctcaaagagagctctccgagtcgcgtggttga

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