Oryza sativa japonica (Japanese rice) (RefSeq): 4336254
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Entry
4336254 CDS
T01015
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4336254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4336254
Enzymes [BR:
osa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4336254
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
4336254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
4336254
NCBI-ProteinID:
XP_015636431
UniProt:
Q7X881
Q7FAC6
LinkDB
All DBs
Position
4:24593234..24604893
Genome browser
AA seq
1383 aa
AA seq
DB search
MARPEEKLRCTKEPFIEDVGTRRIKSIRFSMFSGNEVRQSAEVQVWNSRIYNHEMKPVPN
GLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCICKSCS
RVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFINGVAKKGRAGLI
ILHDCSKTLDGSTEELRDALSHKKEKLSISAVRMLDPAIVLSLFKRMTDEDCELLNLGDR
PEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTGGQFMKC
FDCWQHLQLQVVEYINSDAPSLPESQHRGLVQRLKGKTGRFRGNLSGKRTEYTGRTVISP
DPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANFIIQPDGTKLHL
KYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIMPWRTLRFNESV
CNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLV
TRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVLVRPNACTKVFL
NLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNGNKDGMFSTLVR
DYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKIDGGYKDCHDLIA
SYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPLIMSQCGSKGSP
INISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYTGLTATEFFF
HTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIVQFLYGDDGMDP
AKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHDASSDDGCSEKF
KQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISVKQLQVFLDTCL
SRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINAAKK
ISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNLVVKLDMQRIEA
LHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLYELHHLKSMLPK
VIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKTKSNHIMEVNRTL
GIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYGIAKMKSSVLML
ASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLDHLPEFKYQPDP
ILA
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggccggaggagaagctgcggtgcacgaaggagcccttcatcgaggatgtcggc
acgcggaggataaagagcatccggttcagcatgttctcggggaacgaggtgcgccaatcc
gcggaggtgcaggtttggaacagccggatctacaaccatgagatgaagccggtgcccaat
ggattgctcgacacgcggatgggtgcggcaaacaagcttggggagtgcagtacttgccat
ggttcatttgctgaatgcccgggtcattttggttacttgaagctcgcccttccagttttt
aatgttggattctttaactgtattttggatgtattgaagtgcatctgcaagagctgcagc
agggttcttcttatggagaaagatcggctagagtttttgaagaaaatgagaaatcccaaa
gcagatccgctacagaaaagtgctatcatgaaaaaagtgagggacaaatgcaaactatcc
cgttgcccctggtgtggattcataaatggtgttgctaaaaagggcagagcagggttgatt
attcttcatgattgtagcaaaacattggatggaagcacagaagagcttcgggacgcacta
tcacataagaaagagaaactatctattagtgctgttcgcatgctagaccctgcaattgtt
ctatctcttttcaaaagaatgaccgatgaggattgtgagttgctaaacctcggtgatagg
cctgagaaacttattgtgacagagattgcagtgccacctgtacctatacgtccttctgtt
ttcgtggctggtggaagaatgagcaatgaagatagcattaccgtcatattgaagagtatt
gctaatactaattccatccttaaggagaaccttcaaactggtggtcagttcatgaagtgc
tttgattgctggcaacaccttcaacttcaagttgttgaatatatcaacagtgacgcaccc
tctcttcccgagtcacaacatcgaggccttgttcagcgactcaaagggaagacaggccga
tttcgtggtaacttgtctggaaaacgtaccgagtacactggaaggactgtcatttctcct
gatccaaacttgagaataacagaggtggctattcccatcctgatggctcgagttttgact
tatcctgaaagagtttcatactataacatagagaagctgcgtcagtgtatacggaatggt
ccacacaaacatccaggggcaaatttcatcatacaacctgatggaacaaagctgcactta
aagtattgcgatagaagaattgctgctcgagatttgaagtatggctgtgtagtcgaaagg
catttagaagatggagacattgtcctcttcaatagacaaccgagcttgcatagaatgtca
attatgtctcacagggctaggattatgccctggagaacactaaggtttaacgagtctgtc
tgtaacccatataatgctgattttgatggcgatgagatgaatttgcatgttcctcagact
gaggaagcccgcactgaagcgcttatgctcatgggggttcagaacaatttatgtacccca
aagaatggggaaatactggttgcatccacgcaagactttttgacttcctcttttctggtt
acaagaaaagataacttttatgacaggtcgtcattttctctcttatgttcatatcttggt
gatgcaatggaaaacattgatttgccaacacctgctctgattaagcctattgagctttgg
actggtaaacaactcttcagtgtgttagtacgtcctaacgcatgtacaaaggtgtttctg
aatcttactgttaaagagaaaatttataagactcctaagggttcaactctggaacctgaa
gcaatgtgtcccaatgatggttttgtctacttccgaaacagtgaacttctatctgggcaa
gttgggaaggccactttaggtaatgggaataaggatggcatgttctccactcttgtaaga
gattataattctcatgctgcggcaagctgtatgaaccgcttggcaaaatttagtgcaaga
tttatagggaaccatggtttctcaattggtgtggacgatgtccaaccgggagaacattta
aaccaagagaagaaaatgaaaatagatggagggtacaaagattgccatgatcttattgct
tcctattccaaaggtgcactccgtttgcagcccggttgcaacgcagcccaaacattggag
caaagtataactcgtgtactgaatgaaatcagagaagaagctggaaaagtctgtatgaat
acacttcactggaggaacagcccattgatcatgtctcagtgtggatctaaaggttctcca
atcaacattagtcagatggttgcatgtgttggccaacaatcagttggagggcgtcgtgcc
ccgaatggcttcatagatcgaactcttccccactttcctataaattcaaagactcctgca
gccaaaggctttgtcgctaattctttctatactggcttgactgccaccgaattcttcttc
catacgatgggtgggcgagaaggtcttgttgatacagcggttaaaacagctgaaacagga
tatatgtcccgcagattaatgaagggattggaagatctctcagttttctatgatcagacg
gtccgcaatgctagtggtggtattgtacagttcctctatggagatgatggcatggatcct
gcaaagatggaagggaaagatggaaagcccttaaatttggatcaattgtttatgaaagtc
atggccacttgtcctcaaaggggacagaatacattatctccaggtgaaatcttacaaatt
ttaaatgacaagctctctgaacatgatgcctcctctgatgatggttgtagcgaaaagttc
aagcaactgttaacgtattttcttgaggatcgtataaaattgctgaagagcacaaggaga
gcgcttctcctagatgaagatcatgttggagagaggcactccagctttgaagaatccatt
gctgctaatatttctggtatatctgtgaagcaactacaggttttcttggacacatgttta
tctcgttaccacttgaagaaaattgaagccggagcatcaattggggcaattggggctcaa
agtattggagagcctggaactcagatgacattgaaaactttccattttgcaggagtagct
agcatgaatgttactcttggtgttcctcgcatcaaggaaattatcaatgctgctaaaaag
ataagcacacctattatcactgctgagttactttctgagaaggatgtgttgtctgcacgc
attgtgaaaggctctatggaaaaggcagtgctgggtgaggtggctgaagccataaagatt
gtgttgaaatcaagtcaaccaaacttggttgttaaactcgatatgcaacgtatagaagcc
ctgcacatgggcatctctgctgactctgtgcagctgtcaatattgaatcatccaaaaata
aagctaaaatctgagcatgttcgtgttattgataaatccaagttgagaatttatccagct
ggaatagataagtccaaacttctatatgagttacatcatctcaaatccatgcttccaaaa
gtgatcgtgaagggtattccaactgttgaaagagctgtgatcagcgaaactggtgaagaa
aatgacaaaagatacaagttgttggttgagggaacaaatctcttggcagtaatgggtact
ccaggagttgatgctatgaaaacaaaaagtaaccacatcatggaagtgaaccgaacactc
ggaattgaagctgcgaggagatctattattgatgaaattcagtatacaatgaaaagtcat
gggatgaacattgattcgagacatatgatgcttctggcagatttgatgacatacaagggt
gaaattcttggcattactagatatggtattgcaaaaatgaaaagtagtgtgctgatgctg
gcttcgtttgagaaaacagcggagcatctctttaatgcatcatacagtggtcgtgaggat
cagatagagggagttagtgaatgcattatcatgggtatacccatgcaacttggcactggt
attctcaaagtcagacaaaggcttgaccatttgcctgaatttaaatatcagcctgatcca
atattggcgtga
DBGET
integrated database retrieval system
