Oryza sativa japonica (Japanese rice): 4336407
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Entry
4336407 CDS
T01015
Symbol
LTR1, myb, MYB4, OsJ_15470, OsMyb4
Name
(RefSeq) transcription factor MYB4
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4336407 (LTR1)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4336407 (LTR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
HTH_Hrp3
SPATS2-like
NST1
Motif
Other DBs
NCBI-GeneID:
4336407
NCBI-ProteinID:
NP_001389328
LinkDB
All DBs
Position
4:complement(join(26345686..26346196,26346743..26346872,26346961..26347093))
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AA seq
257 aa
AA seq
DB search
MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINY
LRPDIKRGNFSKEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPA
QGGHVAASGGKKHKKPKSAKKPAAAAAAPPASPERSASSSVTESSMASSVAEEHGNAGIS
SASASVCAKEESSFTSASEEFQIDDSFWSETLSMPLDGYDVSMEPGDAFVAPPSADDMDY
WLGVFMESGEAQDLPQI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggggagggctccgtgctgcgagaagatggggctcaagaagggtccatggacgccggag
gaggacaaggtcctcgtcgcccacatccagcgccacggccacggcaactggcgcgccctg
cccaagcaagccgggctgctgcgttgcggcaagagctgccggctccggtggatcaactac
ctgcggccggacatcaagcggggcaacttctccaaggaggaggaggacaccatcatccat
ctccacgagctgcttggcaacaggtggtccgcaattgccgccaggttgcccgggaggacg
gacaacgagatcaagaacgtgtggcacacccacctcaagaagcgcctcgatgcgccggct
cagggcggtcatgtcgcggcgagcggcggcaagaagcacaagaagccgaagagcgcgaag
aagccagccgccgccgccgccgcgccgccggcgtcgcccgagcggtccgcctcgtcgtcg
gtgacggagtcctcgatggcctcgtcggtggcggaggagcacggcaacgccgggatcagc
tcggcgtccgcgtccgtgtgcgccaaggaggagagctccttcacctcggcttccgaggag
ttccagatcgacgacagcttctggtcggagacgctgtcgatgccgctggacgggtacgac
gtgtccatggagcccggcgacgcgttcgtcgcgccgccatccgccgacgacatggactac
tggctcggagtgttcatggagtccggcgaagcgcaagacttgccgcagatctag
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