Oryza sativa japonica (Japanese rice) (RefSeq): 4336482
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Entry
4336482 CDS
T01015
Name
(RefSeq) syntaxin-81
KO
K08492
syntaxin 18
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
osa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4336482
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
4336482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4336482
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
4336482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6331
Motif
Other DBs
NCBI-GeneID:
4336482
NCBI-ProteinID:
XP_015635852
UniProt:
Q7X7I8
A0A0P0WCV2
LinkDB
All DBs
Position
4:26528426..26531663
Genome browser
AA seq
316 aa
AA seq
DB search
MSRVRDRTEDFKESVRVAALGHGYTESQLAVLMSSFIIRKPAPKLPFTKAAIKTLESIRE
LEKFIVKHRKDYVDLHRTTEQERDNIEHEVSVFVKACKEQIDILKNRIHEEKGGSTKTWL
GTSDESSRLDLIAHQHGVVLILSERLHSVTVQFDRLRTMRFQDAINRAMPRKRIQKKRET
KAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETK
MIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLF
FFVLTFSVLFLDWYSK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggttcgcgacaggaccgaggacttcaaggagtccgtccgcgtcgccgcgctc
ggccatgggtacacggagtctcagttagccgtgctcatgtcttccttcatcatccggaag
ccggcccccaaattaccctttacaaaggctgcaatcaagacgcttgagagtatcagggaa
ctggagaagtttattgtgaagcataggaaggactatgttgacttgcatcgcaccacggag
caagaaagggacaacattgagcatgaggtcagtgtttttgtaaaagcatgcaaggaacaa
atagatatcctaaagaacaggatccatgaagaaaaaggtggaagtacaaagacatggctt
ggtacaagcgatgagagctcccggttggatttgatagctcaccagcatggcgtggttttg
attttgagtgagcgtcttcactcagtaactgtgcaatttgatcgtcttcggaccatgcgt
tttcaagatgctattaacagagcgatgccaagaaaacggattcagaagaaacgagaaacc
aaagctgctgaaccatctaagccaaaccttgtattaaaatctgatgtttcaaaggttgaa
gatcaggaggtctctactgcaccactaagagttcaagaacaactcttggatgatgaaaca
agagctcttcaggtggagttgacaaatcttcttgatgctgtccaagaaacagagacaaag
atgatagagatgtcagcacttaatcatctcatgtcaacacatgttctacaacaagctcag
cagatccagtatttatatgaccaggcagttgaagctacaaacaatgtggagcgtgggaac
aaggagctatcccaggcgatccagcgcaacagcagcagtagaaccttcctcctacttttc
ttctttgttcttaccttttccgttctctttctggattggtacagcaaatga
Oryza sativa japonica (Japanese rice) (RefSeq): 4351534
Help
Entry
4351534 CDS
T01015
Name
(RefSeq) syntaxin-81 isoform X1
KO
K08492
syntaxin 18
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa04130
SNARE interactions in vesicular transport
osa04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
4351534
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
4351534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4351534
Membrane trafficking [BR:
osa04131
]
SNARE
Syntaxin (Qa)
Stx-rER
4351534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin-18_N
SNARE
DUF6331
Motif
Other DBs
NCBI-GeneID:
4351534
NCBI-ProteinID:
XP_015620666
UniProt:
B9GBY2
A0A8J8Y7I7
LinkDB
All DBs
Position
12:2678046..2681533
Genome browser
AA seq
316 aa
AA seq
DB search
MSRVRDRAEDFKESVRVAALGHGYTESQLAALMSSFIIRKPPPKLPFTKAAIKTLESIRE
LEKFIVKHRKDYVDMHRTTEQERDNIEHEVSVFVKACKEQIDILKNRIHEEKGGSTKTWL
GTSDESSRLDLIAHQHGVVLILSERLHSVTAQFDRLRTMRFQDAINRAMPRKRIQKKRET
KAAEPSKPNLVLKSDVSKVEDQEVSTAPLRVQEQLLDDETRALQVELTNLLDAVQETETK
MIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLF
FFVLTFSVLFLDWYSK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggttcgcgacagggccgaggacttcaaggagtccgtccgcgtcgccgcgctc
ggccatgggtacacggagtctcagttagccgcgctcatgtcttctttcatcatccggaag
ccgccccccaaattaccctttacaaaggctgcaatcaagacgcttgagagtatcagggaa
ctggagaagtttattgtgaagcataggaaggactatgttgacatgcatcgcaccacggag
caagaaagggacaacattgagcatgaggtcagtgtttttgtaaaagcatgcaaggaacaa
atagatatcctaaagaacaggatccatgaagaaaaaggtggaagtacaaagacatggctt
ggtacaagcgatgagagctcccggttggatttgatagctcaccagcatggtgtggttttg
attttgagtgagcgtcttcactcagtaactgcacaatttgatcgtcttcggaccatgcgt
tttcaagatgctattaacagagcgatgccaagaaaacggattcagaagaaacgagaaacc
aaagctgctgaaccatctaagccaaaccttgtattaaaatctgatgtttcaaaggttgaa
gatcaggaggtctctactgcaccactaagagttcaagaacaactcttggatgatgaaaca
agagctcttcaggtggagttgacaaatcttcttgatgctgtccaagaaacagagacaaag
atgatagagatgtcagcacttaatcatctcatgtcaacacatgttctacaacaagctcag
cagatacagtatttatatgaccaggcagttgaagctacaaacaatgtggagcgtgggaac
aaggagctatcccaggcgatccagcgcaacagcagcagtagaaccttcctcctgcttttc
ttctttgttcttaccttttccgtcctctttctggattggtacagcaaatga
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integrated database retrieval system
