Oryza sativa japonica (Japanese rice): 4336527
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Entry
4336527 CDS
T01015
Name
(RefSeq) autophagy-related protein 13A
KO
K08331
autophagy-related protein 13
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
4336527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4336527
03029 Mitochondrial biogenesis [BR:
osa03029
]
4336527
Membrane trafficking [BR:
osa04131
]
Autophagy
Autophagosome formation proteins
ULK complex
4336527
Atg1 complex
4336527
Mitochondrial biogenesis [BR:
osa03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
4336527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
4336527
NCBI-ProteinID:
NP_001406649
LinkDB
All DBs
Position
4:complement(join(27459072..27459363,27462149..27462282,27463106..27464242))
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AA seq
520 aa
AA seq
DB search
MSSMSDSGTGGRGGAELMVEQFHLKVLHAVLAVRGPRPLQPAASASFRRRDRWFHLPLHD
PQPPPAAEGVEAPEAGEPLVVDILLAHAAAGGGGGGGAGGEVVERWTVVCEPWPDAAAGE
GIPVNRAYKRCMTMLRSVYATLRFLPAYRVFRLLCANQSYNYEMVHRVGSFAVPLSRDEE
AAMRSYQFVPVETQHGRLVVSVQYLPSLAAFNLEISSLSPSMLIADYVGSPAAEPMRAFP
ASLTGATGSAFPQALSNQPQRPHSWATPALWPQAPRQQARFSPPHLLNASPTPSPPNFPS
GYLQSRPKGGSAPMSIPQVGDRRSPIHRPITLPPTSPRRVGETGTSSAQQSPSERCPSFG
RADGFRIMDPYASLSPGRKGKDTKDESGRFSALSSCDSPRQDDIDDADYPFAVDDVDTPS
SQPGSSDGKEARDQASSSSHKSQDAAVGSLVHLLKTARPLRNSNCPSQASAVESSEAAST
SSVVSRRKSDALEELQSFKEIKERLMSRSRAKQQEPPEKP
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgtcggactcggggacgggcggccgcgggggcgcggagctgatggtggag
cagttccacctcaaggtgctccatgccgtgctcgccgtgcgcgggccgcgcccgctgcag
ccggccgcgtcggcgtcgttcaggcggcgggacaggtggttccacctcccgctccacgat
ccgcagcctccgcccgcggcggagggagtggaggcgccggaggcgggggagccgctcgtg
gtggacatcctcctggctcacgccgcagccggcggcggcggcggcggcggagcgggcggg
gaggtggtggagagatggacggtggtgtgcgagccctggccggacgccgcggcgggcgag
gggatacccgtgaaccgggcgtacaagcgctgcatgacgatgcttcggtcggtgtacgcc
acgctccgcttcctgccggcgtaccgcgtcttccgcctcctctgcgccaaccaatcctac
aactacgagatggtccaccgcgtcggctccttcgccgtgccgctctcccgcgacgaggag
gccgccatgcgctcctaccagttcgtccccgtcgagacgcagcacggccgcctcgtcgtc
tctgtccagtacctccccagcctcgctgccttcaatctcgagatctcctccttgtcgccc
tccatgctgatcgccgactacgtgggcagccctgctgccgagccaatgcgtgccttccca
gcttcgctcacaggagccacaggttccgctttcccgcaggcgctgtccaatcagccgcag
cgcccgcacagctgggcgacgccagcgctctggccgcaggcgcctaggcagcaagctaga
ttttcgccacctcatttgctcaacgcatcacccactccatcgccacccaattttcccagc
gggtatcttcaatctcgtcctaagggagggtctgcaccaatgagcataccacaggtgggt
gacaggaggagcccaattcaccggccgatcacattgccaccaacgtctccgaggagagta
ggggagacaggaacatctagtgcacaacagtctccatcagagagatgcccctcgtttggg
agggcagatggatttcgaataatggatccctatgcaagcttgtcgccaggacgcaagggc
aaggacactaaggacgaatctggcaggttctctgcactctcctcctgtgattcccctcga
caagatgatatagatgatgcagattatccctttgctgtggatgatgttgatacaccgagc
tcccagcctgggagcagtgatgggaaggaagctagagatcaggcaagttcgtcgtcccat
aaatcacaagatgccgcagttggctctctggtgcacctgctcaaaactgcacgccctctg
cgaaactctaattgtccatctcaagcatcagcggttgaatctagtgaagcagcctcaacc
agttctgtcgtgtcccgtaggaaatctgatgcactcgaagagctccaatcatttaaagaa
atcaaggagaggttgatgtcccggagtagagcaaaacagcaagagccaccagaaaaacca
tag
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integrated database retrieval system
