KEGG   Oryza sativa japonica (Japanese rice): 4336577
Entry
4336577           CDS       T01015                                 
Name
(RefSeq) uncharacterized protein At3g06530 isoform X1
  KO
K14550  U3 small nucleolar RNA-associated protein 10
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    4336577
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4336577
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    4336577
SSDB
Motif
Pfam: HEAT_HEATR1 ARM_At3g06530 BP28CT U3snoRNP10 HEAT_EF3_N
Other DBs
NCBI-GeneID: 4336577
NCBI-ProteinID: XP_015636082
LinkDB
Position
4:join(27949411..27949567,27949717..27949930,27950014..27950109,27950202..27950319,27950407..27950580,27950829..27950999,27951128..27951183,27951321..27951410,27951492..27951640,27951836..27951918,27952026..27952154,27952259..27952333,27952444..27952612,27953161..27953300,27953387..27953494,27953800..27953980,27954642..27954739,27954836..27954985,27955078..27955231,27955573..27955730,27955848..27955929,27956018..27956192,27956945..27957020,27957148..27957318,27957395..27957466,27957547..27957651,27958145..27958234,27958900..27959105,27959186..27959387,27959491..27959670,27959867..27959962,27960055..27960122,27960202..27960538,27960625..27960834,27960962..27961645,27961734..27962137,27962974..27963220,27963578..27963748,27963993..27964223)
AA seq 2158 aa
MSSIASQLQAIKSAVGAAPEPARRPITRPSVLFDAKEAADIDLRAILPIALSGLEHLEGV
NERFRRYRNTLFSETSLEVNREQLTTKENDKLNKSISSYLRLLAGYLQLQAAMQTLEYLI
RRYLVHVYNLDELLLCALPYHDTHTFVRIVQLINLGNSKWAFLDAVKSSGAPPPRIVMVQ
QCIRDKAVLETICNYAAPTKEFHHSRTVVCFCTAVIVECLGAIPKLDTDIVQRVLGFVFD
SLNPAMKGDQDYKAGALMIIGVLATRETLAPKLVQNLIFFVARAAQHDALDTIDLPWLRV
TVMAIISLVQSQSVTDFPKKPLMILKDIRDFSGILSVLCCEFNIERFIRLYVESLVGYSS
SDDSCHSHLIEIVETLNIEKFVERIVYKVLDHCVKASQAAENLDMNRTGLWSKKTLNVIG
KKYPKELRNAIHKFLENSEVNSIGEDFASNLLGLVFDESKGMPTEISDSNIWFSLDHPKA
EVRKSALSKIATSNIFKNHNLNPQNLINMQDAIIHNMYDDDLSVVEAALSIEGLAAVASP
VSLLKVYDDLLANCINIIHKGGPKASKACDVAVSCLEKIIIEYRLHYIEHAKDIAAVVFR
LLIVHPKTVRVNLKALELAKSIQWEFYTSSSLVYNVITTDKMKGISPESVASINMKNIKA
FSETFLANPNKHVEWLADAGKGSAFSRALFLLIILQSLLAPAEVLDMQMSLCQACLPVLK
NKWCQIKPKDGRVGDEINIDKLEKCITELVKHVFNNDTEALNARILVCIFWGLLRVQSSY
IKQSSMINDGGNTLLDDLFLFFITSPGKIIFQKHLQYLMVNCTRAPFQFISKYFVDEGFS
AGVRVESLLMLASICSVCALSETSSLDESLCVQLLLGFPCVMLPLAHENKDVRSSALKCI
EGLSLVWQRLSASLSRNGNGSKLPKCMLSPTFGVFLGSLVNQKTMISSDTRFLPAYISSL
LSPSQDLMVPENLHERFDQSTKDAILHFILRSGMKLSSYGKFMILSILKGVGSILFDVED
VKSLLFDLLDRRNQYQSGCESRQIMSTHEIQILCLLLEVMFSVSNSANVSSETSEALLKV
LRIDVSAQDDPVVVMPCVTALQAVQPVFFDFLKTDTQEKVFASLISMFRTENTEIRNAAR
DAILRINVHASTAVKFIELIAAQGDKKMNSKRIKRKEDLNHDIFKNFDDLFGVKPTASVL
VSLLDVLFLKKDVIQRTCLLQPLFQLLSKLLSDQWILGIVCQYNKGHDASPENPDLSNFM
IEAQQLVLLILKDITDTLQSGHQDELFNCRDINLLINCIQSAKDLGTRNHGFSLIASLAK
AFPQVVSESIEDLFVAIGDAVKQDDSHSQRILEDLLSLLVPCWLARITSIDNLLELFIKA
LVDVVEHRRLTLMVYLLRTLGERKCLSTVIMCLLHSLVGRISHSPEHQGALSLRAMPQEW
EYGLAVNITNQYSYKLWFHCLSKLLQEIRVHEKQYLLPMLHLAMQFILFKLQDTELIFDL
DSEEAANSIQGSLGELMKEVVLCVAAVRDKKTGISGDALKELRDSANTILKVIAGWMCAS
TYFKGISRMLEHSRSVVKRKALGILCETAKGNSLIQKKQKKARKLNHSTPATALQVDKSS
APCFSELCVKILELVDREVDSDSSVRIAAISSLETLAKEYPSDNPAYRKCLAKITNHINS
GDAVTSSRSIYTVGSLINVLGSKALPQLPLIMKNMLQVSHQVSFCPSGKYAHSSTKTDAK
LSNQAIPILLSVLTTVEVIVKKLGEFVNPYLEEILDLVVLHPECASRNDEKLDAKAADVR
KLLTDKVPVRLMLSPLLNLYNGAIKCGEASLSLAFEMLSTLVGAMDRLAVGTYHTKVYEH
CLVALDLRRQHLDSLKNIAIVEQSIIHAITTLTMKLTEATFRPLFLRTLEWAESEVDRST
SKRSMDRAIVFYKLVNSLAEKHRSLFTPYFKYLLEGSVQYLSEDDALISSKQKKKKAKLE
DAPVEQKDKLSGPKLWNLRALVLKSLHKCFLYDNDQKILDSSNFQALLKPIVSQFVIEPP
EHFESVPEAPSVDEVDETLVLCLGQMAVTARSDVLWKPLNHEVLMRTRSDKVRPKMLGLK
VVRHMVQQLKEEYVVLLPETIPFLAELLEDVELPVKTLAQEIVKEMETLSGESLRQYL
NT seq 6477 nt   +upstreamnt  +downstreamnt
atgtcttcgatcgcgtcgcagctgcaagccatcaagtcggcggtcggcgccgcgcccgag
cccgcacgacggcccatcacccggccgtccgtgctcttcgacgccaaggaggctgccgac
atcgacctccgcgccatcctcccaatcgccctctctgggttggagcaccttgaaggcgtg
aatgagagatttcggaggtacaggaacacactttttagcgagactagccttgaggtgaac
cgtgagcagttaactaccaaagagaatgacaagctcaacaagtcaatctcctcctacctt
cgccttctagctggctatttgcagctccaagctgccatgcagacacttgagtatcttatc
cgccgataccttgtgcatgtatacaacttggatgagttgctgctatgtgcattgccatat
catgacacacacacgtttgttcggattgtgcagttgattaacttggggaatagtaagtgg
gcatttcttgatgctgtgaagtcttctggtgcacccccacccaggattgtaatggtgcaa
caatgcatccgtgataaggctgtactggagaccatctgcaactatgctgcaccaacaaag
gaattccatcactcgaggacagttgtctgcttttgcactgcagtgatcgtggagtgcttg
ggtgctattcccaagcttgacacagatattgtgcagagggtgttgggatttgtgttcgac
tcgcttaatcctgcaatgaagggagaccaagattataaggctggcgcgctgatgattatt
ggagtactggcaacacgagaaacactagccccaaaacttgttcagaatttgatcttcttt
gttgcaagggctgcacagcatgatgcgctggacacgattgatttaccatggctccgtgtt
acagtgatggctattataagtcttgttcagtcacaatcagttactgatttccctaagaag
ccattgatgattctgaaagacatcagggatttttctggcatcctttctgtattatgctgt
gagtttaacattgaaaggttcattaggctttatgttgaatcattggttggttacagttct
tctgacgattcctgccactcacacctgattgaaattgttgagaccctaaacatagagaag
tttgttgaaaggattgtgtacaaggttcttgaccactgtgttaaggcatctcaggcagca
gaaaaccttgatatgaaccgcacaggtctatggtcaaagaaaaccttgaatgtaattgga
aaaaaatatccaaaagagcttcgcaatgctatccataaatttcttgagaactccgaagtt
aactcaattggagaggattttgcttccaatttgttgggcttagtgtttgatgaaagcaag
ggcatgccaactgaaatttctgattctaacatttggttcagtctggaccaccctaaggct
gaagtccgtaaatctgctctgtccaaaattgctacatccaatatctttaagaaccataat
ctaaatccacagaacttaatcaacatgcaagatgcaataatacacaatatgtatgatgat
gatctaagtgttgttgaagctgccttatccatagaaggactagctgctgttgccagtcct
gttagccttcttaaagtgtatgatgatctgctagccaattgcatcaacatcattcacaaa
ggtggtccaaaagcatcaaaagcttgcgacgtcgctgtttcatgcttggaaaagataatt
atagagtatcggttgcattatattgaacatgcaaaggacatcgctgcagtagtatttcgt
ctcctcattgttcaccctaagactgtcagggtaaacttgaaggccttagagctagctaag
agtatacagtgggaattttatacaagtagttcacttgtatacaatgtgatcacaactgat
aaaatgaagggcatcagtccagagtctgtagcttccattaacatgaagaatatcaaagca
ttttctgaaactttccttgcgaacccaaataagcatgtggagtggttggctgacgctgga
aaaggaagtgcattttcaagagctttgtttctactcataatattgcagtcactgcttgct
cctgctgaagttttggacatgcaaatgagtctgtgccaagcttgtctgccagttctcaag
aacaagtggtgtcaaataaagcccaaagatggtcgtgttggtgacgagatcaacattgat
aagctcgagaagtgcattacagaactggtgaagcatgttttcaataatgacacagaggca
ttgaatgccagaattcttgtatgcatattttggggcttgctaagagtacagtcatcctat
atcaagcagagttctatgattaatgatggtggaaatacattgcttgatgatttgtttctc
ttcttcatcacatcacctggaaaaatcatcttccagaagcatctacagtatctaatggtt
aactgcaccagggcaccttttcagtttatctccaaatactttgtagatgaaggtttttca
gctggagttcgagtggagagtcttcttatgcttgcttctatttgttctgtatgtgctttg
tctgaaaccagtagtttggatgaaagcttatgtgtgcagcttctgcttggctttccttgt
gttatgctcccacttgctcatgaaaataaggatgtaaggtcctctgctctcaaatgcatt
gaggggctatctttggtgtggcagcggttgagtgcatcactttcaagaaatggaaatggc
agcaaattgcccaaatgcatgctgtccccgacgttcggtgttttccttgggtcactggtt
aaccaaaagaccatgatatcctcagatacaagatttctacctgcctatatttcatcactg
ttgagcccaagtcaagatttgatggtccctgaaaatcttcatgagagatttgaccagtca
acaaaagatgctatccttcacttcatcttgcgctctggtatgaagctctcttcttatgga
aagttcatgattttgtcaatactgaaaggagtaggaagcatcttgtttgatgtagaagat
gtgaagtctttattgtttgatcttctggatcggcgcaatcagtatcagagtggatgtgag
tctaggcagatcatgtccacccatgaaatacaaatcttgtgcttgcttttggaggtaatg
ttctcggtttctaacagtgcaaatgttagctctgaaacatctgaagctttgctgaaagtt
ttaaggattgatgtttcagctcaagatgatcctgttgttgtcatgccatgtgttactgca
ctgcaagctgttcaaccagtattctttgattttttgaagactgatactcaggaaaaagta
tttgcaagccttatttctatgtttcgaactgaaaacactgaaattcgaaatgcggcacga
gatgctatactgcgaattaatgttcatgcctccacagctgtgaaatttattgaattgatt
gcagcgcaaggtgacaaaaaaatgaattcaaaaagaataaagagaaaggaggatctgaat
catgacatattcaagaattttgatgatctatttggagtaaaacctaccgcttctgttctt
gtatctcttctagatgttttatttcttaagaaggatgtgattcaaaggacatgtttacta
caaccacttttccagttattatcgaaacttctttctgatcaatggattttagggatagtt
tgccaatataacaaaggccatgatgcctctcctgaaaatcctgatttatctaatttcatg
atagaagcccagcagttggtactactgattctcaaagatattacggatacactgcaatcc
ggtcaccaagatgaactgttcaactgtagagatataaacctccttattaattgtatacaa
tctgctaaagatctaggaactcgtaatcatgggttttcattgattgcttcattagctaag
gctttcccacaagttgtttcagaaagtattgaggatttgttcgtcgctattggggatgca
gtgaaacaggatgacagccactcgcaacgcattttggaggacttattatcccttttagtc
ccatgttggttagcaaggatcacaagtatagacaatcttcttgagttattcattaaagct
ttggttgatgttgtggaacacaggcgtcttactctcatggtttacctcttgaggacgtta
ggagagagaaaatgtctgagcaccgtgatcatgtgtctgttgcactcattggttggccgt
atttctcattctcccgaacaccagggcgccctatccttgagagccatgccacaagagtgg
gagtatggtttggcagtcaatataaccaaccaatactcatataaattatggtttcattgt
ctttctaagctactacaagaaatcagggtgcatgagaaacaatatctgcttcctatgctc
catttggcgatgcaatttatcctatttaagctgcaagatacagagttgatttttgacctt
gattctgaggaagctgctaactctatccagggatctcttggagagcttatgaaggaggtt
gtcttgtgcgttgcggctgtcagagacaaaaaaactggcatttctggtgatgctctaaaa
gaacttagagactctgcaaatacaattctaaaagtaatcgcaggctggatgtgtgcttca
acgtatttcaaagggattagccggatgttagaacattcaagaagtgttgtgaaaagaaag
gcgcttggaatattgtgcgaaactgcaaagggaaatagcttgatccagaagaagcaaaag
aaagctagaaaattaaatcatagcactcctgctactgcacttcaagtggacaagagctct
gccccttgtttcagtgagttgtgcgttaagattctagagttggttgacagagaggttgat
tcagacagttcagtgagaattgcagctatttcttcacttgaaacactggcaaaagaatat
ccctctgataatcctgcatataggaagtgccttgcaaaaatcactaatcacatcaactct
ggtgatgctgttacttcttctaggtcaatctacactgtaggctctcttataaacgtgctc
gggtcaaaagcattacctcagcttccattgatcatgaaaaatatgttgcaagtatcacac
caagtatcattttgccctagtggaaaatatgctcacagttccactaaaactgatgctaaa
ctttctaatcaagctatacccatattgttgtcggtattgacaactgtcgaggtgattgtc
aaaaagcttggtgaatttgttaatccatatttggaagaaattctggatttggtggttttg
catccggagtgtgcttctcgaaatgatgaaaaattggatgcaaaagcagctgacgttcgg
aagctactgactgacaaagttccagttcgacttatgctttcacctttacttaatctgtac
aatggtgctatcaaatgtggagaagcaagtctgtccttggcttttgaaatgctttctact
ctagttggtgctatggatcggctggctgtaggaacttaccatacaaaagtttatgagcat
tgcttggtagctcttgatctccgccgtcaacatttggactccttgaagaatatagctata
gtcgagcaaagtattatccatgccattaccactctcacaatgaagcttacggaggctact
tttaggcctctcttccttcgtactcttgaatgggcagagtctgaagttgatcggtccaca
tcaaagagaagtatggaccgtgcaattgttttctacaagttggtgaacagcctcgctgaa
aaacacaggtccttgttcacaccttacttcaagtacctgcttgagggatctgtacaatat
ctatcagaagatgatgctttgatcagttccaagcaaaagaagaagaaggccaaacttgaa
gatgctccagtggaacagaaggataaattatctggaccaaaactgtggaatttaagggcc
ctggtgttgaaatccttacacaaatgtttcctttacgacaatgaccagaagatccttgat
tcctccaatttccaggctcttttgaaacctattgtttctcagtttgttattgagccacct
gaacattttgaatcagttccagaagctccatcagttgatgaagttgatgaaactcttgtt
ttgtgcttggggcaaatggcagttactgcacggtcagatgttttgtggaagcctcttaac
cacgaggtgctgatgaggacaaggagtgacaaagttcgccccaaaatgctcggtctgaag
gttgtgaggcacatggtccaacagctaaaggaggaatacgtggttctcctcccggagacc
attccattccttgctgaattactcgaggacgtggagctccctgttaagactctagcccag
gagattgtgaaagagatggaaaccctcagcggcgagagcctccgtcagtacctgtga

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