Oryza sativa japonica (Japanese rice): 4336583
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Entry
4336583 CDS
T01015
Name
(RefSeq) probable transcription factor MYB58
KO
K09422
transcription factor MYB, plant
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4336583
Transcription factors [BR:
osa03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
4336583
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
4336583
NCBI-ProteinID:
XP_015634881
UniProt:
Q0JB89
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All DBs
Position
4:join(28008112..28008362,28008943..28009195,28009328..28009855)
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AA seq
343 aa
AA seq
DB search
MARAPGGVRRRSGRRGAGGGGAGGGGEALRKGPWMAEEDEVLLEHVRTHGPMDWSSIRSK
GLLPRTGKSCRLRWVNKLRPNLKSGCKFTAEEERVVIELQAQFGNKWARIATYLQGRTDN
DVKNFWSTRQKRLARLLRGPLPAARPNKHNSGKGKAPSSSSLDSQTATFHQSSASLDQAS
LEGNSLGWQCREAAPFMGYDQACSGFFAFEGPLPLQLLPPADGEASSSNAAQSAPPPLLF
DQPPYPLINFPGWPERYVDVGHGFVDAGAMDGLAYQELLPMVQSVPMIMPFFGMECAHDA
VKHGAFDDLPPNMFDDAVDQPPPPPPPPPPPSPSPSPSRDDVL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagcacctggtggcgttcgccgaaggagcgggaggaggggcgcgggcggcggc
ggcgccggaggcggaggcgaggcgctgcggaagggcccgtggatggcggaggaggacgag
gttctgctggagcacgtccgcacccacggccccatggactggagctccattcgatccaaa
ggcctcttgccgcgcaccggcaagtcctgccgcctccgctgggtgaacaagctcaggcca
aacctcaagagcggttgcaagtttactgccgaggaagagagggtggtgatcgagttgcag
gcgcagttcgggaacaagtgggcgaggatcgcgacctacttgcagggcaggacggacaac
gacgtgaagaatttctggagcactcggcagaagcggctcgccaggctcctccgcgggcct
ctccctgctgcacggcccaacaagcacaacagcggcaagggcaaagcgccctcgtcatct
tctctcgactcccaaacagccacgttccaccagagctcggcctccctggatcaagcttca
ttggagggcaactccctcggctggcaatgccgcgaggctgcaccgttcatgggatatgat
caggcatgctccgggttcttcgctttcgaggggccactgccgctgcagctactaccaccc
gccgacggcgaggcgagctcgtccaatgcagctcagtcggcgccaccaccgctgctgttc
gaccagcctccgtaccctctgatcaacttccctggatggccggagagatacgtcgacgtc
ggccacgggttcgtggacgccggcgccatggatggcctcgcctaccaggagctgcttccg
atggtgcagtcggttccgatgatcatgccgttctttggcatggagtgcgcgcatgacgcc
gtcaagcacggggcctttgacgacctcccgccgaacatgttcgacgacgctgttgatcag
cccccaccgccgccgccgccgccgccgccgccatcgccatcgccatcgccgtcgcgcgac
gacgtgttgtga
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