Oryza sativa japonica (Japanese rice): 4336619
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Entry
4336619 CDS
T01015
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X2
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4336619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4336619
Spliceosome [BR:
osa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
4336619
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
4336619
NCBI-ProteinID:
XP_015635445
UniProt:
Q7XU07
A0A0P0WD87
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All DBs
Position
4:join(28297665..28297667,28297814..28297876,28297962..28298099,28298434..28299326,28299506..28299576,28299688..28299790,28300026..28300101,28300543..28300650)
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AA seq
484 aa
AA seq
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MASLADSFLADLDELSDNEAYPEEENAEAVGTEEIGDDDMPDLESLNYDDLDSVSKLQKT
QRYNDIMQKVENALQKGTDFSNQRSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVQKIGNEMDLTLVDLEGLLPSAIIMVISVTASTTSGKPL
SEENLVKTIEACERALTLDAAKKKVLEFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLG
ALAKMPACNVQLLGAKRKNLAGFSTATSQFRVGYLEQTDVFQSTPPALRTRACRLIAAKS
TLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDFEPKKKRGGRRL
RKMKERYAQTDMMKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSTAPSKLSAK
ITKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAHGNLLGSGTQSTYFSETGTFSK
IKRT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgctgattctttcttagcggatcttgatgaactttcagacaatgaagcc
tatcctgaggaagaaaatgctgaggcagtgggcacggaagagattggtgatgatgatatg
cctgacctcgagtctcttaattatgatgaccttgatagtgtttcaaagcttcagaaaaca
caacgttacaatgacattatgcaaaaagttgaaaatgcacttcagaaaggtacagatttt
tccaatcaaaggtcgatcctggaggaagatccagaataccagctgattgttgattgcaat
gctctatcagtagatattgagaatgagatcattataatccataatttcatacgtgacaag
tataggctgaagtttcctgaactagaatcccttgttcatcatccgatcgattatgctcgt
gttgtccagaagattggaaatgagatggatttaacgcttgtagatctggaagggctttta
ccttctgcaattataatggtaatttcagtgacagcatcaacgacaagtgggaagccgctt
tccgaggagaacttggtaaaaactattgaagcatgtgagagagcccttactcttgatgct
gcaaagaagaaggtacttgaatttgtagagagcagaatgggttacattgcaccaaacctg
tctgccattgttggcagcgctgttgcctcgaagttgatgggaactgctggtggtttggga
gcacttgcaaaaatgcctgcttgtaacgttcagttacttggtgctaagaggaaaaatctt
gctgggttttctactgccacatctcagtttcgtgttggctatcttgaacaaaccgatgta
ttccagagtaccccaccagctctgaggactcgtgcttgcagacttatagctgcaaagtca
actctagcagcaaggattgattcgatcagaggtgatccaacaggaaaagctgggcgtaac
ttgttagaagaaatccgtaagaagattgagaagtggcaagaaccgcctcctgcaaagctt
ccaaaaccacttcctgttccagactttgagcctaaaaagaagagagggggtcggcggctt
cgaaaaatgaaagaaagatatgcacaaactgatatgatgaagcttgctaaccgaatgcag
tttggtgtaccagaagagagctcattgggtgatggtttaggggaaggttatggcatgctt
ggacaggcaggaagtggaaagctacgcgtgtcaactgcaccaagcaaactttctgcaaaa
attaccaagaaattcaaggagaagagctatggtagcagtggtgcaacatcggggctgact
tctagtttggcgtttacaccagttcaggggatagagttgtcaaatccacaggcccacggc
aacctgcttggaagtggaactcagagcacctatttttcagagaccgggacgttctcgaag
atcaaaaggacctga
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