Oryza sativa japonica (Japanese rice): 4336689
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Entry
4336689 CDS
T01015
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4336689
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
4336689
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
4336689
NCBI-ProteinID:
XP_066165635
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All DBs
Position
4:join(28915665..28915893,28917232..28917634,28920145..28921354)
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AA seq
613 aa
AA seq
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MASNSSAAAAAAFFGISRDGDQHDQIKPLISHQQHQHQQQQLAASLTGVATAAPTAASSQ
GAPPAAPPAKKKRNLPADPDAEVIALSPKTLLATNRFVCEVCNKGFQREQNLQLHRRGHN
LPWKLKQKNPAQAQRRRVYLCPEPTCVHHDPARALGDLTGIKKHFCRKHGEKKWKCDKCS
KRYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESSRLPPTSLSSL
TSHLYGASNAGNMALSLSQVGSHLTTSLQDGGGHHHHPSPELLRLGGAGGGGGAGGGSSI
AARLDHLLSPSGASAFRPPQPAFFLNAAAAAAATGQDFGDDAGNGQHSFLQAKPFHGLMQ
LPDLQGNGAGGPGAPGPNLFNLGFFANNGNSSGSSHEHASQGLMSNDQFSCGAGGGGGSD
ASAAGIFGGNFVGGDHVSPAGLYNDQAAMLPQMSATALLQKAAQMGATSSANGPGSMFRG
FVGSSPHMRPAAQHMDQSDAHLNDLMNSLAGGGVNAAAMFGGTNGGGVPGAGMFDPRLCD
IEHEVKFSQGGGGGGGAGAGTGDGTRDFLGVGGGGIVHGMSTPRGDHHQSSSDMSSLEAE
MKSASSFNGRRMP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaattcatcggctgcagctgcggcggcgttcttcgggattagcagggatggg
gaccagcatgaccagattaagccgctgatatcacaccaacagcaccagcaccagcagcag
cagctggcagcgtcactgaccggcgtggcaacagcggcgcctactgcggcgtccagccaa
ggcgcaccgccggcggcgccaccggccaagaagaagagaaatctaccagcagacccggac
gcggaggtgatagcgctgtcgcccaagacgctgctggcgacgaaccggttcgtgtgcgag
gtgtgcaacaagggattccagcgggagcagaacctacagctgcaccggcgaggccacaac
ctgccgtggaagctgaagcagaagaacccggcgcaggcgcagcgccgccgcgtgtacctg
tgcccggagccgacgtgcgtccaccacgacccggcccgcgccctcggcgacctcaccggc
atcaagaagcacttctgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctcc
aagcgctacgctgtccagtccgactggaaggcccactccaagatctgcggcacccgcgag
taccgctgcgactgcggcaccctcttctccaggagggacagcttcatcacgcacagggcg
ttctgcgacgcgctggcgcaggagagctccaggctgccgccgacgagcctcagcagcctc
accagccacctgtacggcgccagcaacgccgggaacatggcgctcagcctctcccaggtg
ggctcccacctcaccacctcgctccaggacggcggcggccaccaccaccacccgtccccc
gagctgctccgcctcggcggcgcgggcggtggcggcggggccggcggcgggagcagcatc
gccgcgcggctcgaccacctgctgtcgccgtcgggcgcgtctgccttccgccccccgcag
ccggcgttcttcctcaacgccgccgcggcggcggcggcgactgggcaggatttcggcgac
gacgctggcaatgggcagcactcgttcctgcaggccaagccgttccatggcctcatgcag
ctgcccgacctccagggcaatggcgccgggggccccggcgcgccgggacctaacctcttc
aacctcggcttcttcgccaacaacggcaacagctcggggtctagccatgagcatgccagc
caggggctgatgagcaatgaccagttcagctgtggtgcaggcggcggcggcggttctgac
gcgtcggcggcggggatcttcggcggtaacttcgttggtggcgaccatgtttctcctgca
gggctctacaacgatcaagcggcgatgctgccgcagatgtcggcgacggctctcctccag
aaggcggcgcagatgggcgcgacgtcgagcgcgaacggcccgggctccatgttccgtggc
ttcgtcggctcgtcgccgcacatgcggccggcggcgcagcacatggaccagagcgacgcg
cacctcaacgacctgatgaactccctcgccggcggcggcgtcaacgccgccgccatgttc
ggcggcaccaacggcggcggcgtccctggcgcggggatgtttgatccgaggctgtgcgac
atcgagcacgaggtgaagttcagccagggcggcggaggcggaggcggcgccggcgccggc
accggcgacgggacgcgggatttcctcggcgtcggcggtggcggcatcgtccatggcatg
tcgacgccgagaggagaccaccaccagagcagcagcgacatgagctccttggaggccgag
atgaagtccgcatcgtccttcaacgggagaaggatgccatga
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