Oryza sativa japonica (Japanese rice) (RefSeq): 4336807
Help
Entry
4336807 CDS
T01015
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4336807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
osa03032
]
4336807
Enzymes [BR:
osa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.-
3.1.-.-
4336807
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
4336807
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
4336807
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
4336807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
UvrD-helicase
Cas_Cas4
Helicase_RecD
PhoH
ResIII
Motif
Other DBs
NCBI-GeneID:
4336807
NCBI-ProteinID:
XP_015634569
LinkDB
All DBs
Position
4:29719374..29730119
Genome browser
AA seq
1281 aa
AA seq
DB search
MLRRSLRPRSRRSRPSSAFSTSSSASPRPPPRTPSARRPTAPRSLPLPTYLPPPPPPLIE
EEPSEVSPEVTKTLAPKRVRFSPGMLIKQSQDDGGGEVVTWKISPVNDRLRMVTSRQMTG
MALHPCSNNEKHSSVESTKKWHSSLLGMSRCTASARNLDMCGTGPGGCDGVEDTQSPFRT
PPSLSYRCSEQLNGGVVSDGGPEQLGAGEHKKALLDLLDQVEDAIMEEELPADGENKGEQ
LINGDPKNISCSPIADSDQNVPSQKSLDAPPFDSFLVLEVSEKHKGDNLPCDRYPVKVLR
LLNEHGGKEHAVHLCDEWFHSLISPGDTVSVIGEFTDHGICIIDHDKNLVIVHPELLISG
TRVASSFHCPRRSVLDDRLKSNEYSTSALIGTLLHQVFQAGLLEDVPSTQFLEQQAKEVL
LKNIESLYACGASESNTLKTLIEAVPKILNWYKCFMKVSKCNNVNFGQIEGQKTVGVVEV
MDIEEMAWAPRYGLKGIIDASIRSRVSCNGSSYDRVMPLEFKTGKGTSGQTAVEHTAQVI
LYTLLMTERYLNKDIDLGLLYYLHTDQTLGIKVKRSDLIGLIMRRNELATEILKASISQS
FPPMIQSPSTCNGCRHLVSCTIYHKAHGGNAATSGLGDLFDNLVNHLTVAHHTFLKHWDR
LIDLEARVSQVKKKEIFQPHHSNTGSRHSSPSYFVLDVTNGHSIDSSGKSKRYIYTFLRQ
KLQPETADQPGEHVESVDFSLKCGDSVVLSTKSGRIAVANGYIRDLSRAHITVSLPRRLR
LPGSNSLLEQGDLQCEVWRIDKDESVSSFATMRLNLVQLFAENPQNSHLRKLIVDLEAPR
FDSGGLLSQDPALSYIQSLPNLNNDQQRSLHKILAAKDYALILGMPGTGKTYTMVHAVKS
LLMRGESILLTSYTNSAIDNLLMKLKAEGVDFLRIGRHEAVHPDVKGHCLSTTDIQSVDA
VKARMEQVQVVGVTCLGIYHPLLAHKKFDTCIMDEAGQITLPVSLGPLMLATKFVLVGDH
YQLPPLVQSSEARENGMGVSLFWRLSEAHPQAISALRCQYRMSSGIMELSNSLIYGNRLS
CGSLEIANAKLKLSGRGPVRLKLKEILNPDRAVVFANTDEVPAFEAKEHRTVNNPTEALI
VSWITNELLKRGVAQDGVGIITPYNAQANLIQQHVDASVEVHTIDKYQGRDKECIIVSFV
RSNGNTRASGSSLLGDWHRINVVLTRAKKKLIMVGSAATLSTIPLLRLMIEKVAERGGQL
DLTNKDVQSIRELTSSRLNVQ
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgaagaagcctgcggcctcgcagccgtcgcagccggccaagttcggcattctcc
acttcttcgagcgccagtcccaggcctcctcccagaacgccaagcgccagaaggccgacg
gcccctcgcagcctcccgctgcctacctacctgcctccgccgccaccgccgctcatcgag
gaggagccatcggaggtgtcgccggaggtcaccaagactctggcgccgaagcgggtcagg
ttttctcctgggatgctgattaagcagagccaggacgatgggggtggggaggttgtgact
tggaagatctcgccggtgaatgatcgcctgcgcatggtcacttcaaggcagatgactggt
atggcgcttcatccgtgctcaaacaatgagaagcattcctcggtcgagtctacaaagaaa
tggcattcatcactgctgggcatgtcaagatgtactgcttcagcacgcaatttggatatg
tgtggaactggtccaggtggctgtgacggtgtggaggacacccaaagcccatttcggact
cctccatcactgtcctataggtgcagtgagcagcttaatgggggtgtggtttctgatgga
ggacctgagcagttgggggcaggggagcacaaaaaggcactacttgatcttttagatcaa
gtggaagatgcaatcatggaagaagaattacctgctgatggtgagaataaaggagagcag
ctcataaatggtgatccgaaaaacattagttgttctcctattgctgacagcgatcaaaat
gtaccctcccagaagtcccttgatgccccgcccttcgatagctttttggtgttggaggtg
tcagaaaagcacaaaggcgataacttaccatgtgatcgctatcctgttaaggttttacgt
ttgctgaatgagcacggtgggaaagagcatgcagtccatttgtgtgatgagtggttccat
agccttattagcccaggcgacacagtaagtgtcattggagaattcactgaccatggaata
tgtattattgatcatgacaaaaatcttgttatagtgcatccagaattactcatatctgga
acacgggttgcttctagttttcattgtccaagaaggtctgttctcgatgacagactaaaa
agcaatgaatattcaacaagtgctttgattggtactctgctgcatcaagtattccaggca
gggctacttgaagatgttccttcaacgcaattcttagagcagcaagccaaagaagttctt
ttgaaaaatattgagagtttatatgcatgtggagccagtgaaagcaacacgcttaaaacg
ctgattgaagcagtccccaaaatattgaattggtacaagtgctttatgaaggtatcaaaa
tgtaacaatgtaaattttggtcaaattgaaggacaaaagactgttggagttgtggaggta
atggatattgaggagatggcctgggctccaagatatggtttgaaagggattattgatgct
tctattagatcaagggtttcatgcaatggtagttcatacgacagagtaatgcctctggag
ttcaaaactggtaaaggaactagtggtcagacagctgtggaacacactgcccaagtgata
ttgtacacgctattgatgacggagagatacttgaacaaggatattgacttgggtcttctg
tattatcttcacacagaccaaacattgggcatcaaagtcaagaggtctgatttaattgga
ttaataatgcgtcggaatgagcttgccactgagatcctgaaggcatcgatttcacagagt
tttcccccgatgatacagagtccatctacatgtaatggatgtcgacacctggtttcatgc
accatataccacaaggcgcatggaggcaatgctgcaactagtgggcttggtgatttattt
gataatctcgtgaatcacttgacagttgcacatcatacctttcttaaacactgggacaga
ttgatcgatcttgaagctagagtttctcaggtcaagaagaaggaaattttccagccacat
cattcaaatactgggagcaggcattcttccccatcttattttgtccttgatgttacaaat
ggacattcaatagattcatctggaaaaagcaaaagatacatatatacttttctgcgccag
aagttgcagcctgagacagctgatcagccaggagaacatgttgaaagtgtagattttagc
ctcaaatgcggtgattctgtggtgcttagcacaaaatctgggcgaatagctgttgcaaat
ggatacataagggacctcagccgtgcccatataacggtttcattgccacgacgtctgaga
cttccaggaagtaattccttgttagagcaaggagatctccaatgtgaagtttggcgtata
gataaggatgagtctgtttcttcatttgctaccatgagactcaaccttgtccaactattt
gctgagaatccacaaaactctcacctaaggaagttgattgttgacctcgaggctcccaga
tttgatagtggaggactcctaagtcaagatccggcactatcatatatacaatcattgcca
aatttgaacaatgaccaacagagatcgctgcataaaattctagcagcaaaagattatgcg
cttatcctaggaatgcctggaacaggcaaaacatatacgatggtgcatgccgtgaagtca
ttattgatgagaggggaatctattttgctaacctcatataccaattcagctatagataat
ttgcttatgaagttgaaggctgagggtgtagattttcttcgaattggaaggcatgaagct
gtacatcctgatgtcaaaggccactgcttgtcaacaacagatatacaatcagtagatgcc
gtcaaagctagaatggagcaagtgcaagttgttggagtcacttgtttgggaatttatcac
cctttactagcacataagaagtttgacacatgtatcatggatgaggcaggccagatcaca
ttaccggtatctctgggacctttgatgcttgcaacaaagtttgttctagtaggagatcat
tatcagcttcctccacttgttcagagttctgaagctcgagagaatggtatgggtgtcagt
ttattttggaggttgtcagaagcacaccctcaagcaatttcagcattgcgatgccagtac
cgaatgtcatctggcattatggagctctcaaattcattgatttacggcaataggttatcc
tgtggttcgttggaaattgcaaatgccaaactcaagctttctggcagaggtcctgttcgc
ttgaagctgaaagagatcttgaaccctgatagggctgtcgtctttgcgaacacagatgaa
gtaccagcttttgaggccaaggaacatagaactgtgaacaatcctacagaagcattaatt
gtttcatggatcaccaatgaattgctaaagagaggtgtagctcaagatggggttggtata
ataactccatataatgcccaagcaaatctcattcagcaacatgtagacgcttcagttgag
gttcatacaattgacaagtaccaggggagggataaagaatgcattatagtatcttttgta
cggtccaacgggaatacaagggctagtggttcttctttgcttggtgattggcacaggatc
aacgttgtcttgacacgtgcaaagaagaagctcatcatggtgggatccgctgcaactctt
tcaacgatcccattgttgagacttatgattgagaaggtagctgagcgtggcggtcagtta
gatctgacaaataaggatgtacagtcaattcgagagctaacaagctctcgattgaatgta
caatag
DBGET
integrated database retrieval system
