Oryza sativa japonica (Japanese rice): 4336822
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Entry
4336822 CDS
T01015
Name
(RefSeq) transcription factor bHLH94
KO
K28356
basic helix-loop-helix transcription factor family protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4336822
Transcription factors [BR:
osa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
4336822
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
4336822
NCBI-ProteinID:
XP_015637096
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Position
4:join(30384084..30384461,30385052..30385549,30387367..30387489)
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AA seq
332 aa
AA seq
DB search
MALDTLCSAGGDVLIYDTFNASAAAAAAVVPPASFLFGNNNAGGAAGTETRVQVAAGAVP
EVDQLLKQAQQPGRRKRRRRARSCKSREDAESQRMTHIAVERNRRRQMNEYLAVLRSLMP
ESYVHRGDQASIVGGAIDFVKELEQLLQSLEAQKRTLLMQPPPPPQQQREPKCDAADSTS
AADQETPAAAAAAAAADGPPFARFFTYPQYVWCHNPAQDGGGGGGAAAENRAGVADIEVS
LVETHASIRVMAARRPGQLLKMVAGLQALRLTVLHLNVTALGSLALYSISVKVEEGCGMA
TVDDIAAAVHHVLCIIDAEAASQMLLAGEASG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgacaccctgtgcagcgccggcggcgacgtcctcatctacgacacgttcaac
gcctccgccgcggcggcggcggcggttgtgccgccggcgagcttcctcttcgggaataat
aatgccggcggcgcggcggggacggagacgagggtgcaggtggcggccggggcggtgccg
gaggtggaccagctgctgaagcaggctcagcagccggggaggaggaagcggcggcggcgg
gcgaggagctgcaagagccgggaggacgccgagagccagcggatgacccacattgccgtc
gagcgcaaccgccgccgccagatgaacgagtacctcgccgtgctccggtcgctcatgccg
gagtcctacgtccaccggggcgaccaggcgtccattgtcggcggcgccattgatttcgtg
aaggagctcgagcagctgctgcaatccctcgaggcgcagaagcgcacgctgctgatgcag
ccgccgccgccaccgcagcagcagcgggagcccaagtgtgatgccgcggactccacgagc
gcggccgatcaggagactccggcggcggcggcggcggcggcggcggctgatggaccgccg
ttcgcgcggttcttcacgtacccgcagtacgtgtggtgccacaacccggcgcaggacggc
ggcgggggcgggggcgcggcggcggagaaccgcgccggagtggcggacatcgaggtgagc
cttgtggagacgcacgccagcatccgggtgatggcggcgcggcggccggggcagctgctc
aagatggtcgccggcctgcaggcgctccggctcaccgtcctccacctcaacgtcacggcc
ctcggctcgcttgccctctactccatcagcgtcaaggtggaggaagggtgcggcatggcg
acggtggacgacatcgcagcggcggtgcaccacgtgctctgcatcatcgacgccgaggcg
gcgtcgcagatgctgctcgccggggaggcctccggttag
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