Oryza sativa japonica (Japanese rice): 4336974
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Entry
4336974 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X2
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4336974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4336974
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
4336974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
4336974
NCBI-ProteinID:
XP_015633530
UniProt:
Q0JA69
A0A0P0WEP8
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All DBs
Position
4:complement(join(31606440..31606547,31606651..31606720,31606806..31606996,31607596..31607691,31608281..31608387,31608802..31608844,31609016..31609105,31609328..31609399,31610048..31610251))
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AA seq
326 aa
AA seq
DB search
MANLQPSLSIPPSFAGASPPSPSPIGGGGVGGGVGQPAKDMKMASAEQLVLDLCDPELRE
NALLELSKKREIFQDLAPLLWHSFGTVAALLQEIVSIYSALSPPTLSPGASNRVCNALAL
LQCVASHPETRILFLTAHIPLYLYPFLNTTSKTRPFEYLRLTSLGVIGALVKVDDTEVIS
FLLQTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLRYICATAERFFAVGSVLANM
VVSLAEQPSTRLLKHIIRCYLRLSDNSRACAALQTCLPDMLKDGTFNNCLRDDPTTRRWL
QQLLLNVTGAGMGAAPQPGLDHMMGI
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatctgcagccctcgctttccattccgccctccttcgccggggcctcgccgcca
tcgccttctccgatcggcggcggtggcgtgggcggcggggtggggcagccagccaaggat
atgaagatggcgtcggcggagcagctggtgctcgacctctgcgaccccgagcttcgcgag
aacgccctcctcgagctctcgaagaaaagagagatatttcaagatctggccccacttctt
tggcattcttttggaacagttgctgcacttcttcaggaaattgtgtcaatctactctgca
ctttcacccccaacattgtcaccaggtgcatcgaaccgagtctgcaatgcacttgcactt
cttcagtgtgttgcatctcaccctgagaccaggatccttttcttaactgctcatattccc
ctgtacctgtacccattcttgaatactaccagcaagacaagaccttttgaatacctgcga
ctcaccagcctgggtgtcatcggtgcacttgttaaggttgatgatactgaagttatcagt
tttctgctgcaaactgaaataattcctctgtgtttgcgtaccatggaaatgggaagtgag
ctgtcaaaaactgtggccaccttcattgttcagaagattctcctcgatgatgttggattg
cgctacatttgtgccactgctgagcgtttctttgctgtaggcagtgttttagcaaacatg
gtggtttcacttgctgagcagccttccacaaggttgctgaagcacattatccgatgttac
cttaggctgtcagacaattccagggcatgtgctgcactacaaacttgcctccctgacatg
ctgaaggatggcacgttcaataactgtcttagggatgatcctacaacaaggcgctggctc
cagcaattgcttcttaatgtgacaggcgcaggcatgggagctgctcctcagccaggcctg
gatcacatgatggggatataa
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