Oryza sativa japonica (Japanese rice): 4337052
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Entry
4337052 CDS
T01015
Symbol
APG8B, ATG8B
Name
(RefSeq) autophagy-related protein 8B isoform X1
KO
K08341
GABA(A) receptor-associated protein
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
4337052 (APG8B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4337052 (APG8B)
04121 Ubiquitin system [BR:
osa04121
]
4337052 (APG8B)
03029 Mitochondrial biogenesis [BR:
osa03029
]
4337052 (APG8B)
Membrane trafficking [BR:
osa04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
4337052 (APG8B)
Ubiquitin system [BR:
osa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
4337052 (APG8B)
Mitochondrial biogenesis [BR:
osa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
4337052 (APG8B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG8
APG12
DUF2201
Motif
Other DBs
NCBI-GeneID:
4337052
NCBI-ProteinID:
XP_015637094
UniProt:
Q7XPR1
LinkDB
All DBs
Position
4:complement(join(32224261..32224355,32224501..32224619,32225193..32225245,32225335..32225390,32226458..32226494))
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AA seq
119 aa
AA seq
DB search
MAKSSFKLDHTLERRQAEANRIREKYSDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ
FVYVVRKRIKLSPEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLL
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atggccaagagctcgttcaagctggaccacacgctcgagaggaggcaggctgaggctaac
cgtatcagagaaaagtacagtgacagaattcctgtgattgttgagaaagctgaaagaagt
gatattcctgacatcgacaagaaaaagtacctggtccctgctgatcttaccgttgggcag
tttgtctatgttgttcggaagcggatcaagctcagtcctgagaaagcaatcttcatcttt
gtgaagaatactcttccaccaacagctgctctgatgtccgcaatttacgaggagaacaag
gatgaggatgggttcctctacatgacctacagtggcgagaacacctttgggctgctctag
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integrated database retrieval system
