| Entry |
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| Name |
(RefSeq) DNA polymerase I A, chloroplastic-like isoform X1
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| KO |
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| Organism |
osa Oryza sativa japonica (Japanese rice)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:osa00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4337150
03410 Base excision repair
4337150
03420 Nucleotide excision repair
4337150
03440 Homologous recombination
4337150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:osa03032]
4337150
03400 DNA repair and recombination proteins [BR:osa03400]
4337150
Enzymes [BR:osa01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4337150
DNA replication proteins [BR:osa03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
4337150
DNA repair and recombination proteins [BR:osa03400]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
4337150
NER (nucleotide excision repair)
GGR (global genome repair) factors
4337150
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:join(32924764..32924900,32925341..32926070,32926622..32926819,32927164..32927831,32928321..32928744,32928865..32928960,32929683..32929775,32929867..32930061,32930144..32930236,32930484..32930696,32930781..32930870,32931005..32931166)
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| AA seq |
1032 aa
MAAPAPAPAPAQLRRCPCSAPLWAAPSPFRCCGGRRGRSPFIGGGRQDYSHSSSGLGVTD
NSAFKIGVYTNFNVQSNAQEWLEESKRISSIKTRNNVGNTIYKGSTHLRTGILHHEPLED
HKSSNYSSLYNVRERMTPNSLANRHANMELAKHNTRNQAASAVSALTSVVNDDIKPLNRS
SGSELKTQWQPDSKTDASVLKISKVETSLQFDDKARDGYDGDEHECTAKNTVQDSPAKAP
MSKESKDARKALATVYDKVLVVDNVKSARSVVQLLTSKYKNFIHACDTEVANIDVKQETP
VSHGEVICFSIYSGNSDAEADFGNGKTCIWVDVLDGGRDVLMEFAPFFEDPSIRKVWHNY
SFDSHVIENYGIKVAGFHADTMHLARLWDSSRRIDGGYSLEGLTNDHRVMGVVPKELQKI
GKRSMKTIFGWKKIKKDGSAGKIISMEPVEVLQRDDREMWICYSSLDSMSTLRLYESLKS
KLEKKHWTFDGCPRGSMYDFYEEYWRPFGALLVKMETAGMLVDRGYLSEIEKVAVAQRKL
AADKFRKWASKYCPDAKYMNVNSDTQIRQLFFGGIENRCKPGETLPKSRTIKVPNDGSLI
AEGKKTPKYCTIELFSIVEDLKTDLFTASGWPSVSGDALRSLAGKLPTDLVYTTDDVEDD
DSGDSEISEHDLNDTASYGTAYEAFGGGKKGKEACHAIAALCEICSIDSLISNFILPLQG
NHISCDEGRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRQAFVAAPGNSLIVADY
GQLELRILAHLASCKSMLDAFKAGGDFHSRTAMNMYQHIRDAVEEKKVLLEWHPQPGQEK
PPVPLLKDAFGAERRKAKMLNFSIAYGKTPVGLARDWKVSVKEAKDTLKLWYRDRKEVLA
WQMKQKELAQEKCEVYTLLGRSRRFPNMAHATSGQRGHIERAAINAPVQGSAADVAMCAM
LEIDRNARLKELGWRLLLQVHDEVILEGPTESADLAKSIVVECMSKPFYGTNILNVELAV
DAKCAQNWYAAK |
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| NT seq |
3099 nt +upstreamnt +downstreamnt
atggccgctccggccccggcgccggcgcccgcgcagctgcggcggtgcccgtgctccgcg
cctctctgggccgcgccgtcgcccttccgctgctgcggcggccgccgcggccgctcgccg
ttcatcggaggcggaaggcaggactactcgcatagtagctcgggccttggagttacagac
aacagtgctttcaaaattggagtgtataccaacttcaatgtgcaaagtaatgcacaagaa
tggcttgaggagagcaagaggatatcctcgatcaaaaccaggaataacgtgggaaacact
atttataaaggttctactcatctacgaacaggaattcttcatcacgaacctttggaagat
cacaaaagttccaactattcttcattgtacaatgtaagagaaagaatgactcctaattct
cttgcaaataggcatgctaacatggagttggcaaagcataacacgaggaatcaagctgca
agtgctgtgtcagcactgaccagtgttgttaacgatgacattaaaccactcaacaggtct
agtggctctgaactgaagactcaatggcaaccagattctaagactgatgcttccgttctg
aagatctctaaagtcgagacaagcctgcagtttgatgacaaagctagggatggttatgat
ggagatgaacatgaatgcacagccaagaatacagtacaagattctccagctaaggcaccc
atgtccaaggagtctaaagatgcgaggaaggcacttgctactgtgtacgacaaagttctg
gtggttgacaatgtgaagtcagctaggagtgttgttcaattgcttacttcaaagtacaaa
aactttattcatgcatgtgacacagaggtagctaatattgatgttaaacaagagacacca
gttagccatggagaggtcatttgctttagcatctactctggcaactctgatgcagaagct
gattttggaaatggaaaaacatgcatttgggtggacgtgctggatggtgggcgagatgtc
ctcatggagtttgctccattttttgaggacccctcaatcaggaaggtttggcacaactat
agttttgatagccatgtcatagagaactatggaatcaaagttgctgggtttcatgctgat
acgatgcatcttgcacgactttgggactcttcaagaagaattgatggaggatattcactt
gaaggacttacaaatgatcacagggtcatgggtgttgtaccaaaggaattacaaaagatt
ggaaagagatcaatgaaaaccatctttggttggaaaaagattaaaaaggatggatctgca
gggaaaattatctctatggagcctgtcgaagtattacaaagggatgacagagaaatgtgg
atctgttattcttcattagattcaatgagtaccttacgactttatgaaagtttgaaaagc
aagctggaaaaaaagcactggacttttgatggttgccctagaggttcaatgtatgatttc
tacgaggagtattggcgtccttttggtgcccttcttgtcaagatggaaacagctggaatg
ctagtcgaccgtggttacctttcagaaattgaaaaggttgctgttgcacagcgaaaacta
gctgcggataaatttcggaaatgggcatctaaatattgtcctgatgcaaaatacatgaac
gtgaacagtgatactcagattcgccaactgttctttggtggtatagagaatagatgcaaa
cctggtgaaactttgccaaagagtagaactattaaagtaccaaatgatggaagccttatt
gcagagggcaagaaaactccaaagtattgtactattgaacttttcagcattgtggaagat
ctgaaaactgatctatttactgcaagtggctggccttcagtaagtggagatgcattgaga
agtttggctggtaaactgccaactgatcttgtttacacaacagatgatgtagaggatgat
gacagtggtgattcagaaatttctgagcatgatctaaacgacactgcctcttatggaact
gcatatgaagcatttggaggaggaaagaaaggaaaggaagcatgccatgccattgcggct
ctctgtgagatttgttctattgactcgttgatatccaactttattcttcccttacagggg
aatcatatatcatgtgacgaggggcggatccactgttcattaaatataaatacagaaaca
gggcgtctgtcagcaagaacaccaaatttacagaatcaacctgcactggaaaaggatcgg
tataaaatccgtcaagcctttgttgcagctccagggaactctctcatcgttgctgattat
ggtcagctggagctcaggatcttggcacatcttgctagttgtaaaagcatgttagatgct
ttcaaagctggtggtgacttccattccaggacagctatgaacatgtaccagcatatccgt
gatgctgttgaagaaaagaaagtacttcttgaatggcatcctcaacctggccaagagaaa
cctcctgtgcccttgttgaaggatgcctttggtgctgagaggcggaaagctaaaatgctt
aatttctccattgcatatggaaaaacacctgttgggcttgctcgagattggaaggtctct
gtcaaggaagcaaaggataccctgaaactctggtacagggatagaaaagaggttttagct
tggcaaatgaaacaaaaagaattagcgcaggagaagtgtgaagtttacactttgctcggg
cggtcgcgccgctttcctaacatggctcatgcaacttctggtcaaaggggtcacattgag
cgagctgctatcaatgcaccagtacagggcagcgcagcagatgttgctatgtgtgctatg
ctcgagatagatcggaatgctcgtcttaaggaactcggttggaggcttctcttgcaggtg
cacgatgaagtgatactggaagggcctacggaatctgccgatctggccaagtcgattgtg
gttgaatgcatgtccaagcccttctacggcaccaacatcttgaatgttgaactggctgtt
gatgccaagtgtgcgcagaattggtatgcagccaagtag |
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