Oryza sativa japonica (Japanese rice): 4337166
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Entry
4337166 CDS
T01015
Name
(RefSeq) beta-D-xylosidase 4
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
4337166
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
4337166
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
4337166
NCBI-ProteinID:
XP_015635545
UniProt:
Q0J9N5
Q7X6F6
LinkDB
All DBs
Position
4:complement(join(33096001..33096572,33096658..33097074,33097171..33097518,33098294..33098391,33098505..33098674,33099757..33100041,33101850..33102257))
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AA seq
765 aa
AA seq
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MAMAARGVLAMVVAVAVVWCNNVARAQTPVFACDASNATVSGYGFCDRTKSSAARAADLL
GRLTLAEKVGFLVNKQAALPRLGIPAYEWWSEALHGVSYVGPGTRFSTLVPGATSFPQPI
LTAASFNASLFRAIGEVVSTEARAMHNVGLAGLTFWSPNINIFRDPRWGRGQETPGEDPL
LASKYAVGYVTGLQDAGGGSDALKVAACCKHYTAYDVDNWKGVERYTFDAVVSQQDLDDT
FQPPFKSCVIDGNVASVMCSYNKVNGKPTCADKDLLSGVIRGDWKLNGYIVSDCDSVDVL
YNNQHYTKNPEDAAAITIKSGLDLNCGNFLAQHTVAAVQAGKLSESDVDRAITNNFIVLM
RLGFFDGDPRKLPFGSLGPKDVCTSSNQELAREAARQGIVLLKNTGALPLSAKSIKSMAV
IGPNANASFTMIGNYEGTPCKYTTPLQGLGANVATVYQPGCTNVGCSGNSLQLSAATQAA
ASADVTVLVVGADQSVERESLDRTSLLLPGQQPQLVSAVANASRGPVILVVMSGGPFDIS
FAKSSDKISAILWVGYPGEAGGAALADILFGYHNPGGRLPVTWYPASFADKVSMTDMRMR
PDSSTGYPGRTYRFYTGDTVYAFGDGLSYTKFAHSLVSAPEQVAVQLAEGHACHTEHCFS
VEAAGEHCGSLSFDVHLRVRNAGGMAGGHTVFLFSSPPSVHSAPAKHLLGFEKVSLEPGQ
AGVVAFKVDVCKDLSVVDELGNRKVALGSHTLHVGDLKHTLNLRV
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcggcgaggggagtgttggccatggtggtggcggtggcggtggtgtggtgc
aataatgtggcgagggcgcagacgccggtgttcgcgtgcgacgcgtcgaacgcgacggtg
tccgggtacgggttctgcgaccggacgaagagcagcgcggcgcgggcggcggacctgctg
gggaggctgacgctggcggagaaggtggggttcctggtgaacaagcaggcggcgctgccg
cggctggggatcccggcgtacgagtggtggtcggaggcgctgcacggcgtctcctacgtc
ggccccggcacccgcttctcgacgctcgtccccggcgccaccagcttcccgcagcccatc
ctcaccgccgcctccttcaacgcctccctcttccgcgccattggcgaggtggtgtcgacg
gaggcgagggcgatgcacaacgtcgggctggccgggctcacgttctggagccccaacatc
aacatcttccgcgacccgcggtggggacgcggccaggagacgcccggcgaggacccgctg
ctcgccagcaagtacgccgtcggctacgtcaccggcctccaggacgccggcggcggcagc
gacgcgctcaaggtcgccgcctgctgcaagcactacaccgcatacgacgtcgacaactgg
aagggcgtcgagcgctacaccttcgacgccgtggtgtcccagcaggatctggacgacacg
ttccagcccccgttcaagagctgcgtgatcgacggcaatgtggccagtgttatgtgctcc
tacaacaaggtcaatgggaagcctacctgtgcagacaaggacctcttgtcaggagtcatc
agaggggactggaagctgaacggatacattgtgtcggattgcgattcggttgacgtactg
tacaataaccaacactacaccaagaaccctgaagacgcagctgccatcacaatcaaatca
ggtttggacctgaactgcggcaacttcctggcgcagcacaccgtggcggcggtgcaggcc
gggaagctgtcggagtccgacgtcgaccgggccatcaccaacaacttcatcgtgctcatg
cgactcggcttcttcgacggcgacccgaggaagctccccttcggcagcctcggccccaag
gacgtgtgcacgtcgtcgaaccaggagctggcccgcgaggccgcgcgccagggcatcgtc
ctcctcaagaacaccggcgcgctgccgctctccgccaagtccatcaagtccatggccgtc
attggccccaacgccaatgccagcttcaccatgatcggcaactacgaaggtacgccgtgc
aagtacacgacgccgctccagggcctcggcgccaacgtcgccaccgtgtaccagccggga
tgcaccaacgtcgggtgcagcgggaacagcctccagctcagcgccgccacgcaggccgcg
gcgagcgctgacgtgaccgtgctggtggtcggcgccgaccagtccgtggagcgcgagagc
ctggacaggacgagcctcctcctgccaggacagcagccgcagctcgtctcggctgtcgcc
aacgcctccaggggccccgtcatcctcgtcgtcatgtccggcgggccgttcgacatctcc
ttcgccaagtccagcgacaagatctccgccattctttgggtcggctaccccggcgaagcc
ggtggcgccgccctcgccgacatcctcttcggataccacaatcctggtggaaggttgccg
gtgacgtggtacccggcgtcgttcgccgacaaggtctcgatgaccgacatgcgcatgcgg
ccggactcgtcgaccggctaccccggccggacataccggttctacaccggcgacacggtg
tacgccttcggcgacggcctgagctacaccaaattcgcgcacagcctcgtgtcggcgccg
gagcaggtggccgtgcagctggccgagggccacgcctgccacaccgagcactgcttctcg
gtggaggccgccggcgagcactgcgggagcctgtccttcgacgtccacctccgcgtgcgg
aacgccggcgggatggccggcgggcacaccgtgttcctcttctcgtcgccgccgtcggtg
cacagcgcgccggcgaagcacctgctcgggttcgagaaggtgtcgctggagcccggccag
gccggcgtggtggcgttcaaggtggacgtgtgcaaggacctgagcgtcgtcgacgagctc
ggcaaccggaaggtggcgctgggcagccacacgctgcacgtcggcgacctcaagcacacg
ctcaacctgagggtttaa
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