Oryza sativa japonica (Japanese rice): 4337190
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Entry
4337190 CDS
T01015
Name
(RefSeq) putative chloride channel-like protein CLC-g
KO
K05016
chloride channel 7
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
4337190
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4337190
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
osa04040
]
4337190
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
4337190
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
4337190
Ion channels [BR:
osa04040
]
Chloride channels
Chloride channel (CLC)
4337190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
4337190
NCBI-ProteinID:
XP_015636607
UniProt:
Q2VBU9
LinkDB
All DBs
Position
4:join(33327535..33327782,33327898..33328098,33328220..33328397,33329339..33329601,33329750..33330019,33330278..33331406,33331806..33331943)
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AA seq
808 aa
AA seq
DB search
MAPRDQSCGDGGEVDPEGGIEAPLLSSGSSFFQDPAHEDGDGDEEARRRRRRFLLAGRSQ
SNTTSQVALVGVGVCPIESLDYELIENEVFKQDWRARGRGHILRYVALKWALCFLVGVLS
AAAGFVANLGVENVAGAKFVVTSNLMLAGRYGTAFAVFLVSNFALTMLATVLTVYVAPAA
AGSGIPEVKAYLNGVDAPDIFSLKTLVVKIVGCIAAVSSSLHVGKAGPLVHTGACIASIL
GQGGSSKYHLTCKWLRYFKNDRDRRDLVTCGAGAGIAAAFRAPVGGVLFALEAVSSWWRS
ALLWRAFFTTAMVAVVLRALIDFCKSDKCGLFGKGGLIMFDVTSDYITYHLVDLPPVITL
GVLGGVLGSLHNFFLDKVLRLYNFINEKGQKYKLLLAAVVTICTSCCLFGLPWIASCKPC
PSDTEEACPSIGRSGNFKKYQCAMNEYNDLASLFFNTNDDTIRNLYSAGTDDEFHISSIL
VFFFTSYFLGIFSYGLALPSGLFVPVILTGATYGRLVGMLIGSQSTLDHGLFAVLGSAAL
LGGSMRMTVSVCVVILELTNNLLMLPLVMLVLLISKTVADAFNANIYDLLVKLKGFPYLE
GHVEPYMRQLSVSDVVTGPLQAFNGIEKVGHIVHVLRTTGHNGFPVVDEPPFSDSPVLFG
LVLRAHLLVLLRKKDFIPNCSASALDASKQFLPHDFAKPGSGKHDRIEEIEFSAEELEMF
VDLHPFTNTSPYTVVETMSLAKAHVLFREVGLRHLLVLPKSSKRAPVVGILTRHDFMPEH
ILGLHPFLFKTRWKKVRFGKSAFTNLVF
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaagggaccagtcatgtggggacggcggcgaggtggatccggagggtggcatc
gaggcgccactcctctcctccggctcctcgttcttccaggacccggcgcacgaggacggc
gatggcgacgaggaggcgcgacggcggcggcggaggttcctcctcgccggccgctcccag
tccaacaccacctcccaggtggccctcgtcggcgtcggcgtgtgccccatcgagagcctc
gactacgagttgatcgagaacgaagtgttcaagcaggactggagggcgcgggggcggggt
cacatcctgcgctacgtggcgctcaagtgggccctctgcttcctcgtcggcgtcctctcc
gccgccgccggattcgtcgccaacctcggcgtcgagaacgtcgccggcgccaagttcgtc
gtcacctccaatctcatgctcgccggcagatacgggacagcgtttgcggtgttcctggtt
tcgaatttcgcccttacgatgttagcaacggtgctgacggtgtatgtggcgccggcggcg
gccgggtcgggcatccctgaggtgaaggcttacttgaacggggttgatgcccccgacata
ttttctctaaagaccctggtggtgaagattgtgggttgcattgctgcagtatcatcatca
ttgcatgtgggaaaagctggtcctctagtacacacaggtgcatgcattgcatctatactt
ggacaaggtgggtcaagtaaatatcacctgacatgtaaatggctaaggtacttcaagaat
gatagggaccgaagggaccttgttacttgtggtgctggtgctggtattgctgctgctttc
cgggcaccagttggtggagtcctgtttgctcttgaagcagtgtcttcatggtggaggagt
gccctactctggcgagcatttttcacaacagcaatggttgctgttgtgcttagggcattg
atagacttctgcaaaagtgacaagtgtggcttgtttgggaaaggtggacttataatgttt
gatgtgacttcagattacatcacctaccatttggtcgatttaccgccagtaatcactcta
ggagttcttggtggagtactaggaagcttgcacaactttttcctggacaaggttcttcgt
ctctacaattttattaacgagaaagggcaaaagtacaagctgctcctggctgcagtagtc
accatttgtacatcctgttgtctcttcggcttgccatggattgcttcttgcaaaccttgt
ccaagtgacaccgaagaagcctgtccatccataggaagatctggtaattttaagaagtat
cagtgtgcaatgaatgagtacaatgacttagctagcctgttcttcaacaccaacgatgac
accattagaaacctttacagtgctggcactgatgatgaattccatatctcttcaatactt
gtcttcttcttcacatcgtatttcctgggcattttcagctatggccttgctttaccatcc
ggcctttttgtgccagttattttgacaggtgcaacttatggccgccttgttggcatgtta
attgggtcccaatcaacattagatcatggcctttttgcagttcttggctctgctgccctt
ctaggaggatcaatgagaatgactgtctcagtttgtgtcgtcatcctagagctgactaat
aatttacttatgcttcctttggttatgctggtccttctcatatcgaagacagtggcagat
gcttttaatgcaaatatttatgatttgcttgttaaattgaaaggatttccttatctcgaa
ggccatgttgaaccttacatgaggcaattgtctgtcagtgatgttgtaactggtcctcta
caggcattcaatggcatagagaaggttggccatatagtgcatgtcttaaggacaactgga
cataatggttttcctgttgttgatgagccaccattttcagattctcctgtcttatttggt
ctagttcttagagcccacttgcttgttctgctgagaaagaaagatttcattcctaactgc
tcagcttcagcactggatgcttccaagcaattcttgcctcatgattttgctaaacctggc
tcaggaaagcatgacagaatagaggaaatagaattcagtgcagaagaactggaaatgttc
gtagatttgcatccgttcacaaacacgtctccttacactgtggtcgagactatgtctttg
gctaaggcccatgtgcttttccgcgaagttggattgaggcatcttttggttctaccaaaa
tcgtctaagagagcgcctgttgtaggcatactgacaaggcacgacttcatgcctgagcat
atattgggtcttcatcctttcctcttcaagactagatggaagaaggtgcggtttggcaag
tcagcattcaccaacctcgtcttctga
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