KEGG   Oryza sativa japonica (Japanese rice): 4337228
Entry
4337228           CDS       T01015                                 
Name
(RefSeq) small RNA degrading nuclease 1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    4337228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:osa03009]
    4337228
Ribosome biogenesis [BR:osa03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    4337228
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 DUF4159 ERAP1_C
Other DBs
NCBI-GeneID: 4337228
NCBI-ProteinID: XP_015636862
UniProt: Q0J9I1 B9FCV5
LinkDB
Position
4:complement(join(33665854..33666099,33666222..33666326,33666404..33666511,33666588..33666722,33666884..33666984,33667116..33667185,33667263..33667379,33667622..33667759,33667992..33668060,33668177..33668266,33668382..33668561,33668641..33668673))
AA seq 463 aa
MGKRLAGAEKEVLVEIVRFTQKNGLKGAEGGWKDFLARNDKKFGASVSDPKKRSKDVLLA
FLLTFSKDFQKYFGKLIRRLNERSAFEQFLKEFPDKISPQLKLVQLTAEHPEYRKNYNFP
SYKEGWKVLREGKITNFMKSTMLAIDCEMVLCHDGTEALVRVCVVNSNLEVKLDELVNPL
KAVADYRTSITGLSKKDLKGVTCSLVDVQKSLKKLLSKGKILIGHSLSKDLHALKFDYSR
VIDTAYIFKYANLPTTASASLNSLCKSVLGYAVREEGEPHNCLKDAEAAMNLVLAKLKHG
FNDPIEIARDSVPESDMMKLLAHKIPVYLPCQELLKLFSGNPSIDEKIDSRVRGDYYSTC
ISFGDRDEVEKAFDELDGQEAKDSSGRLQKNVLLKRDNGDVASFYVRKMAYGAQLNKSEL
SNKRPPPTEHVEPTKEDNDGDKQKKRKTGKKHEKKKAKISVAE
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgggcaagcggctcgccggcgccgagaaagaggtgctcgttgagatcgtcaggttcacc
cagaagaacgggctcaagggcgccgaggggggatggaaggatttcttggctcggaacgac
aagaagttcggagcttccgtgagtgaccccaagaagcggtccaaggatgtgctgcttgct
ttcctgctaaccttctccaaagatttccagaagtacttcggaaaattgataaggcgtctg
aacgaacgaagtgcttttgagcagttcctgaaggaatttcctgacaagatttctcctcag
ctgaagcttgttcaactgacagcagaacacccggagtacaggaaaaattataatttccca
tcttacaaagagggatggaaagtgctgcgtgaaggcaaaattaccaattttatgaagtca
actatgttggcaattgactgtgagatggtcctttgccatgatggtacggaagccttggtc
cgagtatgtgttgtcaacagcaatctagaggtgaagttagatgaacttgtaaacccctta
aaagctgttgcagactataggacaagcattactggtttgtctaagaaggatttaaaagga
gtcacatgctcattagttgatgttcagaaatcgttgaagaagctcttgtccaaaggaaag
atcttgattggtcatagcctatcaaaagatttacatgctcttaagtttgactactctcgg
gttattgatacagcatacatctttaagtatgcaaatttgcctactactgcatcagcctct
ttaaacagcctgtgcaagtctgttttgggctatgctgttcgagaagaaggggagccacat
aactgcttgaaggatgcagaagctgcgatgaatctagttctcgccaagcttaagcatgga
tttaatgatcccattgaaattgcaagagatagtgtacctgaatctgatatgatgaagttg
cttgctcacaaaattccagtctacctgccttgtcaggagctgctcaaattattttctgga
aatcccagtattgatgagaagattgattcaagggttcggggtgattattattctacatgt
atttcatttggagacagagatgaggtagagaaggcatttgatgaactggatggccaagag
gccaaggactctagcgggcgacttcaaaaaaatgtgctgctgaaacgcgacaatggggat
gtggcaagcttctatgtacgaaagatggcgtatggcgctcaactaaacaagtcagaactt
tcaaacaagagaccgccacctaccgagcatgtagaaccaacaaaagaagataatgatggg
gataagcaaaaaaagcgaaaaactggtaaaaagcatgagaagaagaaagcaaagatatca
gtggctgaatga

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