Oryza sativa japonica (Japanese rice): 4337373
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Entry
4337373 CDS
T01015
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4337373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4337373
Enzymes [BR:
osa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
4337373
DNA repair and recombination proteins [BR:
osa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4337373
Prokaryotic type
4337373
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
4337373
NCBI-ProteinID:
XP_015634353
UniProt:
A0A0P0WGI7
B9FD96
LinkDB
All DBs
Position
4:complement(join(34903733..34903799,34904484..34904567,34904693..34904828,34905554..34905584,34905976..34906134,34907123..34907343,34907433..34907646))
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AA seq
303 aa
AA seq
DB search
MAPPLPPTAPKTIADYLIRPSKRLRPTSPAPAAAASAPLSSSSLSPEQRRRADTNLALAR
ARRHLRLAESKASGGTAKLEELLVEETWLEALPGELHKPYALELCRFVAHERLHSPVPVY
PPPHLVFHALHATPFDRVKAVIIGQDPYHGPGQAMGLSFSVPEGIKIPSSLANIFKELQK
DLGCTVPSHGNLERWAVQGVLMLNTVLTVREHQANSHAKKGWEQFTDAVIKTISLKKSGI
VFILWGNSAQAKTRLIDETKHHILKSAHPSGLSASRGFFGCRHFSKTNQILERLGLSAID
WQL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgcctctccctcccaccgcccccaaaaccatcgccgactacctcatccgcccc
tccaagcgcctccgccccacctctcccgctcccgccgccgctgcgtcggcccccctctcc
tcctccagcctctcgccggagcagcgccgccgcgccgacaccaacctcgcgctcgcccgg
gcgcgccgccacctccgcctcgccgagtccaaagcgtcgggcggcaccgcgaagctggag
gagctgctcgtcgaggagacgtggctggaggcgcttcccggggagctgcacaaaccctac
gcgctcgagctctgccgcttcgtcgcccacgagaggttgcatagcccggtgcccgtctac
ccgccgccgcatctagtcttccacgcgcttcacgccaccccgttcgaccgtgttaaggcc
gtcatcatcgggcaggatccataccatggacctggtcaggcgatggggttgtctttctca
gtaccagaggggatcaaaattccttctagcttagcaaacatatttaaagagctgcaaaaa
gatctaggttgcaccgtgccttcacatggaaacttggaaagatgggctgtgcagggtgtt
cttatgctcaacactgtattaactgtgagagaacatcaagccaattcacatgccaagaaa
ggatgggagcaatttactgatgctgtcattaagacaatatcactgaagaaatctggaata
gtctttattctctggggaaactcagctcaagcaaagacaagattgattgatgaaacaaaa
caccacattttgaaatccgctcatccatcagggctgtctgcaagcagaggtttctttgga
tgcaggcacttttctaaaacgaatcagatcttggagaggctgggactatctgccattgat
tggcaactctag
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