Oryza sativa japonica (Japanese rice): 4337429
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Entry
4337429 CDS
T01015
Name
(RefSeq) uncharacterized protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
4337429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
osa03400
]
4337429
DNA repair and recombination proteins [BR:
osa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
4337429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
SR_plectin_7
Rad17
SRPRB
DUF2203
Motif
Other DBs
NCBI-GeneID:
4337429
NCBI-ProteinID:
XP_015635783
UniProt:
Q7XKD3
LinkDB
All DBs
Position
4:join(35271561..35272120,35272238..35273153,35273232..35273756,35273871..35274329,35275241..35275546)
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AA seq
921 aa
AA seq
DB search
MAAAAAAAAAKPNLLLPVSVAIPSSRVSLPTGLVCSARSPPPRLRAAAAAAAASQALTSP
VAAETPEAKQMRVETEAALEWGGVCARLAGFASTAAGRAACGEGRVPVGRSREESERLLE
QTAAAALLPAPLDFGGVEDVSAAIAAAAGARLLAVREICGVGRSIRAARRVFDQLKTLSE
ETPDGRSYTPLLDIMQDCDFLTELVQRIEFCLDYTLSVVLDRASDKLATIRKERRKNIDM
LESLLRDTSTKIFQGGGIDSPVVTKRRSRMCVGVKASHKHLVPGGIVLSSSGSGATYFME
PRDAIRLNNMEVKLSGDERAEELAILGLLTSSIADSEMKIRHLMGKILELDLACARGSYA
LWINAVRPAFTDRDSDTQLNPNSECSVFIEGIQHPLLLEQSLSMVKESTRVGKGQLSDEH
LVSPMPIPLDMQVRNDTRIIVISGPNTGGKTATMKTLGLASLMSKAGMFFPAKGTPRLPW
FDQVLADIGDHQSLEHSLSTFSGHISRLRKIVQVVSKDSLVLIDEIGSGTDPSDGVALST
SILKYLASRLNLAIVTTHYADLSRLKAVDDRFENAAMEFCLETLQPTYQILWGSTGNSNA
LSIAKSIGFDQKVLARAQEWVEKLLPDKQKERQGLLYGSLLDERKLLESQANEAASVLSD
VERLYNEIRSEADDLDSRVAALRATESEKVQQELKFVKSQMDQIIKNFESQLKNSELEQY
NSLMRKAEAATASLAATHQPTDFTFGDEENESSYVPEIGDKVYVEGLGGGSMASVVETLG
EDGSCMVQYGKIKVRVKGNKIKLVQRGTKDTSASSPVKGKGRTPKRSAAEANQDGNVSFG
PVVQTSKNTVDLRGMRVAEASHELQMAIDGCRSYQVLFVVHGMGTGAVKECALGILRNHP
RVAKFEDESPLNYGCTVAYIE
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgccgccgccgccgccgcgaaacccaaccttcttcttccagtctccgtg
gctatcccctcttctagggtttctcttcccaccggcctcgtatgcagcgcacggtccccg
ccgccacgcctcagggccgccgccgccgccgccgccgcctcccaggccctaacgtcgcct
gtcgcggcggagactccggaggcgaagcagatgcgggtagagacggaggccgccctggaa
tggggcggcgtgtgcgcgcggctggccgggttcgcctccaccgccgcggggcgcgccgcc
tgcggagaggggcgggtgcccgtcgggcggagccgggaggagagcgagcggctgctcgaa
cagacggcggcggccgcgctgctgcctgctccgctggatttcggcggcgtggaggacgtg
tccgccgccatcgccgcggcggctggggcccggctgcttgcggtgagggagatatgtgga
gtcgggcgcagcatccgtgccgcacgcagggtgttcgaccaattgaagacgctctcagag
gagacaccagatggaaggagctacactcctcttctggatataatgcaagactgtgacttc
ttgacagaacttgtgcaacggatagagttttgccttgattatactctttctgtggtcctt
gatcgggccagcgataaactagcaacaatccgcaaggagaggaggaagaacattgatatg
ttagaatctctgttgagagatacatccacaaagatcttccagggtggtgggattgatagc
cctgttgtcactaagcgccgttctaggatgtgtgtcggtgttaaagcttcacacaagcat
ctggttcctggtggaattgttttgagttccagtggctctggcgcaacatattttatggag
ccaagggacgccatcaggctgaacaacatggaagtaaagctctcaggtgatgaaagagct
gaagaattagcaatattgggtctacttacttcaagcatagctgactccgaaatgaagatc
aggcatttgatggggaaaatattggaacttgacctggcttgtgccagaggttcatacgct
ttatggataaatgctgtgaggccagcctttactgacagggatagtgatactcaactgaat
ccaaatagtgaatgctcagtttttatcgagggcattcagcatcctttacttcttgaacag
tctcttagtatggtaaaagaatcaaccagagtagggaaaggacagctttctgatgaacat
cttgtctctccaatgcctattcctctggacatgcaggtgagaaacgatactaggataatt
gtgatctctggacccaacactggaggcaaaactgccaccatgaagacgttggggttggcc
tctctgatgtcaaaggctggaatgttcttcccagccaaaggaacccctaggcttccatgg
ttcgatcaagttcttgcagatatcggagatcaccagtcgctggagcatagcctctctacc
ttcagtgggcacatatcacgtcttcgcaagattgtacaagttgtgtcaaaagattctctg
gttcttattgatgagatcggcagtggtacggatccgtcagacggtgtagccctttcaaca
agcatcttgaagtatcttgctagtaggcttaatctggccattgtgacaactcattatgct
gatctaagtcgtctgaaagctgttgacgatcgatttgagaatgctgcaatggaattttgt
ttggaaactctgcaaccaacatatcagatcttatggggcagtactggtaattcaaatgca
ttgagtattgccaagtccattggttttgatcagaaagtgcttgctcgtgcacaagaatgg
gttgagaaacttttgcctgacaaacagaaggaacgccaaggtttactctatggttctttg
ctagatgaaagaaaactactggagtctcaggcaaatgaagcagcatctgttctttcagac
gttgagagactgtacaatgagattcgctctgaagctgatgacctggatagtcgagtagca
gctttaagggcaacagagtctgaaaaggtgcaacaagagttaaagtttgtgaagtctcag
atggaccaaataatcaagaactttgaatctcaactcaagaattcagaacttgaacagtac
aattcactaatgagaaaagcagaagctgccactgcttcattggctgctactcaccagcca
actgattttaccttcggtgatgaagaaaatgagagctcatatgttcctgaaatcggagat
aaagtgtacgttgaggggctgggaggaggaagtatggctagtgttgtcgagacacttggg
gaggatggtagctgtatggttcagtatggaaaaataaaggtccgtgtcaaaggaaacaag
ataaagctggtccaaagaggcacgaaggacacgtcagcctcctctcctgtaaaaggaaag
ggacgaacaccgaagagatcagcagcagaagccaaccaagatggcaatgtctcctttggc
ccggttgtgcaaacatccaagaacacagtggatcttcggggaatgagagtcgctgaggca
tctcatgagcttcagatggcaattgacgggtgcagaagttaccaggtcctgtttgttgtc
catggcatgggcactggagctgtcaaggagtgtgcccttggtatactccgaaaccatcct
cgagtagccaagttcgaagacgagagccctctcaactacggctgcaccgtcgcctacatc
gaataa
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