Oryza sativa japonica (Japanese rice): 4337586
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Entry
4337586 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
osa04131
]
4337586
04121 Ubiquitin system [BR:
osa04121
]
4337586
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4337586
Membrane trafficking [BR:
osa04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
4337586
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4337586
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
FAR1_N
DUF7351
zf-RING_16
Zn_ribbon_8
Pep1_7
CxC4
zf-Nse
RING_Ste5
zf-RING_Vps41
Rad50_zn_hook
zf-C3HC4_3
DUF7129
Motif
Other DBs
NCBI-GeneID:
4337586
NCBI-ProteinID:
XP_015637478
LinkDB
All DBs
Position
5:548587..549747
Genome browser
AA seq
386 aa
AA seq
DB search
MASSSPSSSSSPPSAAGASSYWCYSCDRFVRAPAPHDDSAVACPDCGGGFLEEMSAPPPR
AAYLRRPRAHHANDLRLRRTRRAAAAAAAGDRSPFNPVIVLRRSPAAAGDDDSLAAATSF
ELFYDDGAGSGLRPLPETMSDFLMGSGFERLLDQLTQIEAGGLARARENPPASKASVESM
PTVTIAASHVGADSHCAVCKEPFELGDEAREMPCSHIYHQDCILPWLALRNSCPVCRHEM
PTDAARPRPSNAGTEEETVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNN
GGAPRRISWGSRQSRSTERSAIRRIFRNVFSCFGRSHSSNSQASSSHSRPELNDASDRSA
VFSHGSRSRSTSWRLEDGHADAMVQR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcctccccttcctcctcctcctcccccccttccgccgccggtgcctcctcc
tactggtgctacagctgcgaccgcttcgtgcgcgcccccgccccccacgacgactccgcc
gtcgcctgcccggactgcggcggcggcttcctcgaggagatgagcgcgcccccgccgcgc
gccgcctacctccgccgcccgcgcgcgcaccacgccaacgacctgcgcctgcgccgcacg
cgccgcgccgcggcggcggcggcggccggcgaccgctcgccgttcaaccccgtcatcgtg
cttcgccgctcccccgccgccgccggcgacgacgactccctcgccgccgccaccagcttc
gagctcttctacgacgacggcgcgggctccggcctccgcccgctcccggagaccatgtcg
gacttcctcatgggctccggcttcgagcgcctcctcgaccagctcacccagatcgaggcc
ggcggcctcgcccgcgccagggagaacccaccggcctccaaggcctccgtcgagtccatg
cccaccgtcaccatcgccgcctcccacgtcggcgcagactcccactgcgccgtctgcaag
gagcccttcgagctcggcgacgaggccagggagatgccctgcagccacatctaccaccag
gactgcatcctcccatggctcgcgctccgcaactcctgcccggtctgccgccacgagatg
cccaccgacgccgcccgcccgcggcccagcaatgccggcacagaggaggagacggtcggc
ctcaccatctggaggctgcccggaggcggcttcgccgtcggtaggttcgccggagggagg
aggcccgaggagagggagcttccagttgtgtacaccgagatggatggagggttcaacaac
ggcggcgcgccgaggaggatctcctggggttcgaggcagagccgatcgacggagaggagt
gccattaggcgcatcttccgcaatgtgttctcgtgctttggtcgcagccattcatcgaat
tctcaggcctcgtcttcgcattcgaggccggagttgaacgatgcgtctgaccggagcgcc
gtgttcagccatggctcaagaagccggagcacgagctggaggctcgaagatggccatgcc
gacgccatggtgcaaagatag
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