Oryza sativa japonica (Japanese rice): 4337790
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Entry
4337790 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase SIS3
KO
K16284
E3 ubiquitin-protein ligase SIS3 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4337790
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4337790
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4337790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-rbx1
zf-RING_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
4337790
NCBI-ProteinID:
XP_015640395
UniProt:
B9FME5
Q6AUI1
LinkDB
All DBs
Position
5:complement(join(2613148..2613570,2614177..2614290,2614833..2614949,2615155..2615220,2615761..2615853,2615937..2616075,2617462..2617535,2617610..2617676,2618131..2618169,2618265..2618293))
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AA seq
386 aa
AA seq
DB search
MAMRGVDFKWYDGFFLSMLATSLIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFV
DNGLAAGMGLDLGWQQRYARFCGRIVVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE
GQKWGFLIWLLFSYCGLACIACVAVGKWLSRRHALQQRAQQGIPVSEYGVLVDMIRVPDW
AFEAVGLEMRGMGQDTAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEE
FHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRPSSEPDRPS
ASEVTAATMARYVRSSQPAGQSYLLRLQGLLLRQVVVRHGGGDDMASAENGASHVAAAVT
APATTGGVESELPSIVVDGGHQLPDR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcggggggtcgatttcaagtggtacgatggattcttcctctccatgctcgcc
accagcctaatcattgtctccatcaactggaagaggtatcgtctctgcgcccacccgttg
cacatatggatcgtggttgactacaccaccgtcttcatcttccgccttctcatgttcgtc
gataatggccttgccgccggcatgggattggatcttggatggcaacagagatatgctcgt
ttttgtgggagaattgttgtcttgtcggttcttgtgcttcttctctatccctttctttgg
gtttggactgtgataggaacattgtggtttagcactgcaagaggctgtttacccgaggaa
ggacaaaaatggggcttccttatatggctgcttttcagctactgtggtctcgcctgtatt
gcgtgtgtggctgttggaaagtggctaagccgaaggcatgctctccagcagagggcacaa
cagggaataccagtctctgaatatggggttttggttgacatgatccgtgtgcctgattgg
gcatttgaggccgttggcttggaaatgagaggaatgggccaagatactgcatatcatcct
ggtctttatttaacagctgcccaaagagaggcagttgaggcactgattcaagaactcccg
aagttcagactgaaagctgttcctacagactgcagtgagtgtccaatctgcctggaggaa
ttccatgttggcaacgaggtccgtgggctcccgtgcgcgcacaatttccatgtggagtgc
atcgaccagtggctccggctgaatgtcaagtgcccccgttgccggtgctccgtcttcccc
aacctcgacctgagcgcgctcaacaacctccggccatcctccgagccggaccggccgtcg
gccagcgaggtgacagcggcgacgatggcgcggtacgtgaggtcgtcgcagccggctggg
cagagctacctgctgcggctgcaggggctgctgctgcggcaggtggtggttcggcacggc
ggcggcgacgacatggcgagcgccgagaacggcgcttctcatgtggccgccgcggtgacc
gcgccggcgaccaccggcggcgtggagagcgagctgcctagcatagtggttgacggtggg
catcagctgccggatcgctga
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