Oryza sativa japonica (Japanese rice) (RefSeq): 4337846
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Entry
4337846 CDS
T01015
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
osa
Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4337846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4337846
Spliceosome [BR:
osa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
4337846
Complex B
4337846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_occluded
xRRM
Calcipressin
CHASE8
Motif
Other DBs
NCBI-GeneID:
4337846
NCBI-ProteinID:
XP_015640775
UniProt:
Q0DKM4
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All DBs
Position
5:3210650..3214117
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AA seq
253 aa
AA seq
DB search
MSGEVAAAVGGGAPEENGAPPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFK
TLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERR
KRNDEKPEKKQKREQHHDVSQVGLGVNAYPGVYGAPPLSQLPFAGAQKVMMPEIIVPNNI
LFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKI
TKDNQMLISYAKK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaggtggcggcggcggtcggcggtggcgccccggaggagaacggcgcccct
ccgaacgtcaccatctacatcaacaacctcaacgagaagatcaagctcgaggaacttaag
aaatcgctccgcgctgttttctcccagtttgggaagattcttgatgttctcgctttcaag
actttgaagcataaaggccaagcctgggttgtgtttgaagatgttgcttcagcaactgag
gctttgaagagcatgcaagacttccccttccataataaacctatgagaatccaatatgcc
aagaccaaatcggatattatagcaaaagctgatggcacctttgtacctcgagaaagaagg
aagaggaacgatgagaaacctgaaaagaagcagaagcgtgagcagcaccatgatgtgagt
caagttggcttaggtgtgaatgcttaccccggtgtttatggagctcctccgctctctcag
ctaccttttgctggcgcacagaaggtcatgatgccggagataattgtaccgaataacatc
ctcttcgtccaaaacctcccacatgagacgacccctatgatgcttcagatgctcttctgt
cagtacccagggttcaaggaagtcagaatggttgaagcaaagcctgggattgctttcgtg
gagtacggcgacgaggggcaggctaccgctgccatgaaccatcttcaggggttcaaaatt
acgaaagataaccagatgcttatctcgtatgcgaagaagtaa
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