Oryza sativa japonica (Japanese rice): 4337846
Help
Entry
4337846 CDS
T01015
Symbol
OsJ_17170
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4337846 (OsJ_17170)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4337846 (OsJ_17170)
Spliceosome [BR:
osa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
4337846 (OsJ_17170)
Complex B
4337846 (OsJ_17170)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_MUD2_C
RRM_ACIN1
DUF4523
RRM_YTH1
RRM_occluded
Calcipressin
CHASE8
xRRM
Motif
Other DBs
NCBI-GeneID:
4337846
NCBI-ProteinID:
NP_001407130
LinkDB
All DBs
Position
5:join(3229312..3229423,3229964..3230136,3230458..3230551,3231345..3231436,3232138..3232428)
Genome browser
AA seq
253 aa
AA seq
DB search
MSGEVAAAVGGGAPEENGAPPNVTIYINNLNEKIKLEELKKSLRAVFSQFGKILDVLAFK
TLKHKGQAWVVFEDVASATEALKSMQDFPFHNKPMRIQYAKTKSDIIAKADGTFVPRERR
KRNDEKPEKKQKREQHHDVSQVGLGVNAYPGVYGAPPLSQLPFAGAQKVMMPEIIVPNNI
LFVQNLPHETTPMMLQMLFCQYPGFKEVRMVEAKPGIAFVEYGDEGQATAAMNHLQGFKI
TKDNQMLISYAKK
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgaggtggcggcggcggtcggcggtggcgccccggaggagaacggcgcccct
ccgaacgtcaccatctacatcaacaacctcaacgagaagatcaagctcgaggaacttaag
aaatcgctccgcgctgttttctcccagtttgggaagattcttgatgttctcgctttcaag
actttgaagcataaaggccaagcctgggttgtgtttgaagatgttgcttcagcaactgag
gctttgaagagcatgcaagacttccccttccataataaacctatgagaatccaatatgcc
aagaccaaatcggatattatagcaaaagctgatggcacctttgtacctcgagaaagaagg
aagaggaacgatgagaaacctgaaaagaagcagaagcgtgagcagcaccatgatgtgagt
caagttggcttaggtgtgaatgcttaccccggtgtttatggagctcctccgctctctcag
ctaccttttgctggcgcacagaaggtcatgatgccggagataattgtaccgaataacatc
ctcttcgtccaaaacctcccacatgagacgacccctatgatgcttcagatgctcttctgt
cagtacccagggttcaaggaagtcagaatggttgaagcaaagcctgggattgctttcgtg
gagtacggcgacgaggggcaggctaccgctgccatgaaccatcttcaggggttcaaaatt
acgaaagataaccagatgcttatctcgtatgcgaagaagtaa
DBGET
integrated database retrieval system
