KEGG   Oryza sativa japonica (Japanese rice) (RefSeq): 4337886
Entry
4337886           CDS       T01015                                 
Name
(RefSeq) DNA polymerase epsilon subunit 2
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
osa  Oryza sativa japonica (Japanese rice) (RefSeq)
Pathway
osa03030  DNA replication
osa03410  Base excision repair
osa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:osa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    4337886
   03410 Base excision repair
    4337886
   03420 Nucleotide excision repair
    4337886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:osa03032]
    4337886
   03400 DNA repair and recombination proteins [BR:osa03400]
    4337886
Enzymes [BR:osa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     4337886
DNA replication proteins [BR:osa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    4337886
DNA repair and recombination proteins [BR:osa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      4337886
SSDB
Motif
Pfam: DNA_pol_E_B Dpoe2NT DNA_pol_D_N
Other DBs
NCBI-GeneID: 4337886
NCBI-ProteinID: XP_015638793
UniProt: B9FML5
LinkDB
Position
5:3580565..3585628
AA seq 533 aa
MAAPSAATRRKLQRKFKLRGFTLKVDALEEAAAFLARFPDAEDDALDLLLDELDKEPLQS
SILDRDAVRRVVALLVEADEAVDAASPAATSARSALRVVDSFVVPRFHYDPIKKVFYEHT
SRLAIHGEAGDKAALYRDRYQVLLQRLARDIYFSKPAFDTVMTEDDNCEITSIQSLIGCT
GRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQV
NTCGFPPLEDREASLSMLMGLDFFGGGVIPTEETVRLSTLEKKAMNDMFVILSDVWLDNY
ETMEKLGVVLDGYDSLEAVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARSR
LKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKFYTQEIVF
FRQDLLYRMRRSCLIPPTTEETSDPFEHLVATITHQSHLCPLPLTVQPIIWSYDHCLRLY
PTPHTIVLGDKSDQKAFKYTGITCFNPGSFANDSTFAAYRPCTKEVELSALES
NT seq 1602 nt   +upstreamnt  +downstreamnt
atggcggcgccgtcggcggccacgcgcaggaagctgcagcgcaagttcaagctgcgaggc
ttcaccctcaaggtggacgccctcgaggaggccgccgccttcctcgcccgcttccccgac
gccgaggacgacgccctcgacctcctcctcgacgagctcgacaaggagccgctgcagtcg
tcgattcttgaccgggacgcggtgcggcgcgtggtggcgctgctcgtcgaggcggacgag
gcggtggatgcggcgtctccggcggccaccagcgcgcgctcggcgctgcgggtggtggat
tcgttcgtcgtgccaaggttccactacgatccgatcaagaaagtcttctacgagcatacc
agcagattagccatacatggagaagctggagataaagcagccctgtacagggacaggtat
caggttctgcttcagaggctagctcgtgatatatacttctctaagccagcttttgacact
gttatgaccgaagatgataattgtgagataacttctattcagtccctaattgggtgcact
ggtcggagatggattatgggggtcatatcacagttggaggaacgtcaattctacttggag
gatcttactggagctgtgccaattgacttatcgaatgctaaaatcacttcaggtttcttc
gttgaaaatactgtaattgtagcagaaggggaattgctttcaaatggcattttccaggta
aatacatgtggattccctcctttagaggatagagaagcatcactttcgatgcttatgggg
ctagatttcttcggtggaggtgtcataccaactgaagaaacagtaaggctatcaacctta
gagaagaaggccatgaatgatatgtttgttatactttcagatgtttggcttgacaattat
gagaccatggagaaattaggtgttgttcttgatggttatgatagtctagaagcagttcct
tccctttttgttttaatgggcaatttctgctcccggccctgcaatctggcattcaattca
tttgaagaactcagattgcagttcggaaagcttggtgagatgattgcagctcgatccagg
ttaaaggaacacagtcgttttttgttcattcctggtcctgacgacgcaggcccttctaaa
gcccttccaaggtgtgcacttccgaaatatctaactgaggaactgcagaagcacatccca
aatgcaatattcgtaagcaacccttgcagggtgaagttttatacacaagaaattgtattt
ttccggcaagacctcctttataggatgcggcggtcttgtctgattcccccaacaacagaa
gaaacaagtgaccctttcgagcatctggtagcaaccatcacccatcagagtcatctttgc
ccattgcctcttacagttcagccaatcatatggagctacgatcattgccttcgactctat
cctactcctcatacgatagtactgggcgacaagagcgaccagaaggccttcaaatacaca
ggaataacttgcttcaaccctggttcttttgctaacgatagcacctttgcagcttaccgt
ccttgcactaaggaggttgagctttctgcattagaaagctaa

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