Oryza sativa japonica (Japanese rice): 4337970
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Entry
4337970 CDS
T01015
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4337970
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
osa01009
]
4337970
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4337970
03036 Chromosome and associated proteins [BR:
osa03036
]
4337970
Protein phosphatases and associated proteins [BR:
osa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
4337970
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
4337970
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
4337970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
ARM_ARMC5
Motif
Other DBs
NCBI-GeneID:
4337970
NCBI-ProteinID:
XP_015640697
UniProt:
Q0DKB0
Q6AT11
LinkDB
All DBs
Position
5:complement(join(4688431..4688799,4690002..4691108))
Genome browser
AA seq
491 aa
AA seq
DB search
MWKQFLGKISWKAPKSGGGGGGSPTAKSPLSKGAGNGEPPAPPAAAAGGGGGAEGETRED
VFLRKLNVCCVVFDFSSAAAAAAAERGRDSPERERKRQVLVSLVDCVGAAEEPLTEAMIS
GCVRMFAINLFRVFPPKVRSGAAGAAEADEDEPFFDPSWYHLQAVYELLLRFVMSPVVDV
KIARKYMDNSFVSRLLDLFDSDDPRERECLKTVLHRIYGKFMGNRPFIRKAVSNIFYRFV
FETDRHNGIAELLEVFGSVISGFAKPLKEEHKLFLWKALVPLHKPKTVGVYLPQLTYCII
QFIEKEPKLAGTVIRGLLKYWPVTNSQKEMMFLGELEEVLELTEMAEFQKCMVPLFRRIA
HCLNSSHFQVAERALFLWNNEHLFDLISQNRQTIMPIIYPALERNTRWHWNQSVLNVTMN
VRKMFLEMDEGLLLTCQRNFQEEEEKRAASEERRKLIWENLERNASFRPVTGDIGFSVLP
ASAPLVAPTMT
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcagtttctcggcaagatctcgtggaaggcgccgaaatccggcggcggcggc
ggcggctcgccgacggccaagtcgccgctgtcgaagggcgccgggaatggggagcctccc
gcgccgcccgcggccgccgcaggaggaggaggaggagcggagggggagaccagggaggac
gtgttcctccggaagctgaacgtctgctgcgtcgtgttcgacttctcctccgccgccgcc
gctgccgccgcagagcgcgggagggactcgccggagagggagaggaagcggcaggtgctc
gtgtccctcgtcgactgcgtcggcgccgccgaggagcccctcaccgaggcgatgatctcc
ggctgcgtccgcatgttcgccatcaacctcttcagggtgttcccgcccaaggtccggtcc
ggcgccgccggggcggcggaggccgacgaagacgagcccttcttcgatccctcatggtac
cacctgcaggccgtttatgagctgctcctccgcttcgtcatgtccccggtcgtcgacgtc
aagattgctcgcaagtacatggacaattcttttgtgtctaggttgctcgacttgttcgat
tccgatgatccgagagaaagggaatgcttgaagacagtcttgcataggatatacggcaaa
ttcatgggcaaccggcctttcatccgcaaggcggtgagcaatatcttctataggttcgtg
ttcgagaccgatcgccacaatgggattgctgagctgttggaggtgtttgggagtgtgatt
agtgggttcgcgaagccattgaaggaggagcataagttgttcctgtggaaggcgttagtt
cctcttcacaaaccgaaaacggtgggcgtgtatctcccgcaattgacgtattgtattata
caattcatcgagaaggaaccaaagctcgcggggactgtaatcagaggcctactgaagtac
tggccagtgacgaacagtcagaaggagatgatgttccttggggagttggaggaggtgctg
gaattgacagaaatggctgagttccagaagtgcatggttccgctgtttcgaaggattgca
cactgtctaaatagctcacactttcaggttgctgagagggcactattcctgtggaacaat
gagcacttgtttgatttgatctcccaaaatcgccaaactattatgccgatcatatatcca
gcgctggaaaggaacactcgttggcactggaaccaatcagttctaaatgtaacaatgaac
gtccggaaaatgttccttgaaatggatgagggactgttgttaacttgtcagaggaatttc
caagaggaggaagaaaagcgagctgcatctgaggagcggagaaagcttatatgggagaac
ctagagagaaacgcgtcattccgtccagtcaccggagacattggtttctctgttcttcct
gcatctgctcccttggtagcacccaccatgacataa
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