KEGG T01015: 4337994

Oryza sativa japonica (Japanese rice): 4337994

Entry

4337994           CDS       T01015

Symbol

OsJ_17363, P0683B12.1, SSRP1-B

Name

(RefSeq) fACT complex subunit SSRP1-B

K09272

FACT complex subunit SSRP1/POB3

Organism

osa Oryza sativa japonica (Japanese rice)

Brite

KEGG Orthology (KO) [BR:osa00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:osa03000]
    4337994 (OsJ_17363)
   03036 Chromosome and associated proteins [BR:osa03036]
    4337994 (OsJ_17363)
Transcription factors [BR:osa03000]
Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG2-related
    4337994 (OsJ_17363)
Chromosome and associated proteins [BR:osa03036]
Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    FACT complex
     4337994 (OsJ_17363)

SSDB

Motif

Pfam:

PH1_SSRP1-like POB3_N SSrecog Rttp106-like_middle HMG_box HMG_box_2 HMG_WDHD1 CDC45 YL1

Other DBs

NCBI-GeneID:

4337994

NCBI-ProteinID:

NP_001407159

LinkDB

Position

5:join(4984690..4984743,4985643..4985828,4985933..4986038,4986130..4986266,4986742..4986825,4986910..4987001,4987111..4987219,4987307..4987393,4987490..4987582,4988137..4988334,4988412..4988563,4988663..4988813,4988927..4989025,4989115..4989288,4989433..4989511,4989611..4989732)

AA seq 640 aa
MTDGHHFNNISLGGRGGNNPGQFKLYSGGLAWKRQGGGKTIEVEKSDITSVTWMAIPRSY
QLGVSTKEGLFYRFFGFREQDISSLTNFMEKNMRITPEEKQLSVGGHNWGGIEINGNMLS
FNVGSKEAFEVSLADVAQTQMQGKTDVVLEFHVDDTTGGNEKDSLMDLSFHVPTSNTQFP
GDENRPSAQVLWQAILNKADVGSSEEAVVTFDGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSILRLFVLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEAVVQRDLTLSD
EVLAEKYKDRLENSYQGLIHEVFSKVLRGLSGAKVTRPSTFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEYVEFERHGAGGASISSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFISGKHLKILNLGEAQGRAGGVTAVLQSTDDDAVDPHLERIRNQTGDDES
DEEDEDFVADKDDSGSPTDDSGEEGSDASLSGGEKEKSSKKEASSSKAPLKKRKPKGGDA
AEGSEKRKPKKKKDPNAPKRAIAPFMYFSKAERANLKNSNPELATTEIAKKLGERWQKMT
AEEKQPYVEQSQVDKKRYAEESAAYRGAAAMDVDSGPASD

NT seq 1923 nt +upstreamnt +downstreamnt
atgacggacggccaccacttcaacaacatatccctcggcggccgcggcggcaacaaccct
ggccagtttaaactttattcgggaggacttgcatggaagaggcaaggtggaggaaagacc
attgaggttgaaaagtctgatatcacttctgtgacatggatggcaatccccagatcctat
cagcttggtgtttcaacaaaggagggcctcttctacaggttctttggcttccgtgaacag
gatatcagttcattgactaacttcatggaaaagaacatgagaatcacaccagaggagaag
cagctttctgttggtggacataattggggcggaattgaaatcaatggcaatatgcttagc
tttaatgttggttcaaaggaagcatttgaagtctctctagcagacgtagcacaaactcag
atgcaaggaaaaacagatgttgttctggagtttcatgtggatgatactactggtggtaat
gagaaagattcattgatggatttaagctttcatgtaccaacttcaaatactcaattccct
ggagatgagaatcgtccttcagctcaggttttatggcaggctatcttgaataaggctgat
gttggctcatcagaggaagctgttgttacatttgatggaattgctattcttactccaaga
ggtcgatacagtgttgaacttcatctgtcattcttacgactccaaggacaagctaatgat
ttcaaaattcaatatagcagtattcttcgcctctttgttttaccaaagtcaaataatcct
catacctttgtggttatcactcttgatccaccaattcgcaaaggacagacattatatcct
cacattgttattcagtttgaaactgaagcagtcgttcaaagggatctgacattaagtgat
gaggttttggctgaaaagtacaaggatagactggagaactcttaccagggtctgatacat
gaagtgttctccaaggtccttcgtggcctatctggtgctaaagttacgaggccaagcacg
ttccgcagttgtcaagatggatatgcagtgaaatcatcactcaaagctgaagatggattg
ctctatccgctggagaagggcttcttctttctaccaaagcccccaacactcattctgcat
gaggagattgagtatgttgaatttgagcgacatggtgctgggggtgctagtatctcatct
cactattttgatctcctggtcaagctgaaaaatgatcaagaacatctattcagaaatatc
caaagaaatgaataccataatctcttcaatttcatcagtggcaagcatttgaaaatcttg
aatcttggagaagctcaaggtagagctggtggcgttacagctgttcttcagagcactgat
gatgatgctgttgatcctcatctggagcggatcagaaatcagactggcgatgatgagagt
gatgaagaggatgaagattttgtggcggacaaggacgacagtggatctcctactgatgat
tctggagaggagggttctgacgctagtttaagtggaggagaaaaggagaaatcttccaaa
aaggaagctagtagctcaaaggcgcctttgaagaagaggaagccaaagggtggggatgcg
gcggaaggctcggagaaaagaaagccaaagaaaaagaaggatcctaatgcccctaaaaga
gcaattgcaccattcatgtacttctcaaaagctgagcgagctaatctgaagaacagcaat
ccggagctggctaccacagagattgcgaagaagcttggggagaggtggcaaaagatgaca
gccgaggagaagcagccatacgtcgagcagtctcaagttgacaagaagcgctacgcggag
gagtcagccgcctaccgcggggcggctgccatggatgtggactccggccctgcttcggac
tga

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