Oryza sativa japonica (Japanese rice): 4338285
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Entry
4338285 CDS
T01015
Name
(RefSeq) E3 ubiquitin-protein ligase hel2
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
osa04121
]
4338285
Enzymes [BR:
osa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
4338285
Ubiquitin system [BR:
osa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
4338285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
4338285
NCBI-ProteinID:
XP_015640037
UniProt:
Q0DJH5
A0A0P0WK46
LinkDB
All DBs
Position
5:join(11703322..11703489,11704293..11704601,11705886..11706094,11706181..11706229,11706345..11706434,11706531..11706593,11706719..11708392)
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AA seq
853 aa
AA seq
DB search
MDDSCAVCADALEWVAYGACGHREVCSTCVVRLRFVMGDKHCCICKTECSSVFVTKAMGD
YTKVINDFNIFPPVATEGKVGEYWYHEDSQAFFDDAEHYKMIRAMCRLSCSVCDKAEDQA
GQAAQVRRKSKFRSIEQLKGHLFHQHRLYMCSLCLEGRKVFICEQKLYTRTQLNQHVKTG
DSEVDGSEVERSGFAGHPMCEFCRSSFYGDNELYTHMSREHYSCHICQRQHPGQYDYFRN
YDDLELHFRKDHFLCEDEACLAKKFVVFQSEAELKRHNAMEHGGRMSRAQRNAALQIPTS
FIYRRNEQDERRGRGRGRNSHRDGSDRDTPSMQNGSAIIGNGFPSRVDNVTGSVSVSSSS
GRGESGQSSGNGRVFEHLSFPPLQDQDIPDARMDSAPDETSFPSLSEQQTRYAHALSQSS
LAAKLGDELLFPPLPGSSSNRGSTSTQQGLQSLAKNTLASRLQQRSKGSVKVLHSARPRP
SENPESVPPVSSSPQMWPTPDQGLLHSSSSQLRIVRENGIMSSADSAWNPGGGASNRMKH
SVSTPNLMSGGSSVQALSTSNGGNKKQQPPQSSQTLPAADDVRAANKTLVERMRSALGMD
EDRYSAFKEIAGEYRQGIIGTSEYLSYVEQFGLSHLVPEMARLLPDPQKQKELADAYHTN
IRFRSLQENSDGLTITSKEGGRKKKGKGKSHDVTETSAAPAKDMKDSLADSFLDTVRKLQ
LNKTQEGEAEVLSRDGYRSSKGKAQLITGGSSSSTPCLDGDHGAISMASCAKDDVGKGGG
SSNSNINKQSKKTSKFLRARLGDNSLATLDLSRPTMSPERPERESQGPQVGLPMRGVWKN
GGGQKLFTGNGRK
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgcgcggtgtgcgcggacgcgctggagtgggtggcctacggggcctgc
ggccaccgcgaggtttgctcgacctgcgtcgttcgcctccgcttcgtgatgggcgacaag
cactgctgcatctgcaagaccgagtgctcctccgtattcgtcaccaaggctatgggcgat
tacacaaaagtgataaatgatttcaatattttcccccctgtggcaactgagggaaaggtg
ggggagtactggtaccatgaggatagccaggcattttttgacgatgctgagcactacaag
atgatacgagcaatgtgtcggctttcttgtagtgtgtgtgacaaagctgaagatcaggct
ggccaggcagcacaagtaaggcgcaaaagcaagttcaggagcattgaacagctgaaggga
catttgttccatcaacataggttatacatgtgcagtctttgcttggaggggagaaaggtg
ttcatttgtgaacagaagctttatacaaggacacagttaaatcagcatgtaaaaactggt
gactctgaggtggatggctctgaggttgagcgcagtggttttgcaggacatcctatgtgc
gagttctgcagaagttcattttatggagataacgagctttacacacatatgtcccgagaa
cactattcatgtcacatatgtcaaaggcaacatcctgggcagtatgattatttccggaat
tatgatgacttggagttgcatttccgtaaagatcatttcctctgtgaagatgaagcatgt
ttggcgaagaagtttgtagtcttccagagcgaagcagagctcaagagacataatgctatg
gagcatggtgggcggatgtctcgtgctcagaggaatgccgcacttcagataccaaccagc
tttatatatcgaagaaacgagcaagatgaaaggcgtggtagaggtaggggacggaattct
caccgtgatggatctgaccgggataccccctctatgcaaaatggcagtgcaattataggc
aacggttttccaagtcgagttgataatgttacagggtctgtgagtgtcagttctagttct
gggcgaggagaatctggccaaagctcaggcaatggacgtgtgtttgaacacttgtccttt
cctcctcttcaagaccaggatattcctgatgcaaggatggactctgctcctgatgaaacc
tcattcccttccctctcagagcagcaaaccagatatgctcatgctcttagtcagagttcc
cttgctgccaagcttggggatgagttattattccctccactacctgggtcaagtagcaac
aggggttctacttcaactcaacaggggctacaaagtctagcgaagaacacacttgcatca
aggcttcagcagcgtagcaagggcagtgtgaaagtacttcattctgcccggcctcgccca
tctgaaaatcctgaatcagtccctcctgtttctagttccccacagatgtggcctacacct
gatcaggggctgcttcattctagttcttcccagcttcgaattgtaagagaaaatgggatt
atgtcatctgccgactcggcatggaatcctggaggtggagcttcaaacaggatgaagcac
tctgtttctactcctaatcttatgtctggtgggtcctctgttcaggcactaagtacatct
aacggtggcaataaaaaacaacagccaccacaaagcagccaaacattgcctgctgctgat
gatgttcgtgctgccaataagaccctggttgaaagaatgcgcagtgctttaggcatggat
gaagataggtactctgcatttaaagaaatcgctggtgaataccgtcaaggcatcattggt
acttcagaatatctttcatatgttgagcaatttggtctgtcacaccttgtgcctgaaatg
gctaggctgttacctgatcctcagaagcagaaagaacttgctgatgcctatcacaccaat
atacgcttcagaagcctccaagagaacagtgatggtttaaccattacctcaaaggagggt
ggccgcaagaaaaagggcaagggaaaatctcatgatgttacagaaactagtgctgctcct
gctaaggatatgaaggattcactagcagatagcttcctggacactgtaaggaagcttcag
ttaaacaagactcaggaaggagaggctgaggtgctgtcaagggatgggtatcgatcttcc
aagggaaaggcccaactaataactggaggttcatcatctagtacaccatgtctagatggt
gatcatggtgccatttcaatggcttcttgtgccaaagatgatgtaggcaagggaggaggt
agcagcaacagcaacatcaacaaacaatcaaagaagacatcaaagtttctcagagcccga
ttaggtgataactccttagctacacttgatttgagtcgtcctaccatgagccctgaacga
ccagaaagggaatcgcaaggcccacaggtagggttgcctatgcgaggtgtttggaaaaat
ggagggggccagaagctctttacgggcaatggaaggaagtaa
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