KEGG   Oryza sativa japonica (Japanese rice): 4338351
Entry
4338351           CDS       T01015                                 
Name
(RefSeq) lysine-specific demethylase JMJ18
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
osa  Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:osa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:osa01009]
    4338351
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:osa03036]
    4338351
Enzymes [BR:osa01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     4338351
Protein phosphatases and associated proteins [BR:osa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     4338351
Chromosome and associated proteins [BR:osa03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    4338351
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 4338351
NCBI-ProteinID: XP_015640426
UniProt: Q0DJC2 A0A0P0WKC7
LinkDB
Position
5:complement(join(13651465..13651692,13651791..13651988,13652085..13652188,13652281..13653145,13653271..13653639,13653966..13654127,13654432..13654650,13654732..13655250,13655336..13655413,13655533..13655583,13656635..13656796))
AA seq 984 aa
MEIASAAAHQISPMVSSRDPGEEASAPPPPPPRRGEKRRMRGRTPSPEPASAPQDLCPSG
ACGDNVAGATTTNGKWHPHESYRPEIDDAPVFTPTEEEFKDPIRYITSIRPQAEKYGICR
IVPPSSWRPPCSLKEKNFWECTEFNTRVQQVDKLQNREPTKKKSQPRVQKKRKRRKRLRF
GMTHRRPSANTSEDCADADEKFGFQSGSDFTLDEFQKYADEFKQQYFGIKGSDEIPLSEI
KKKKKNWQPSVDEIEGEYWRIVVCPTDEVEVDYGADLDTSMFSSGFSKLSSDSNRRDPYG
LSCWNLNNLPRIPGSVLSFETEDISGVVVPWLYVGMCFSSFCWHVEDHFLYSMNYMHFGE
PKVWYGVPGADAVKLEEAMRKNLPRLFEEQPDLLHELVTQLSPSVLKSEGVPVYRVVQNP
GEFVLTLPRAYHSGFNCGFNCAEAVNVAPVDWLPHGQCAVELYREQRRKTSISHDKLLLK
TANEAVRQLWMNLSDCKSEQGVYRWQDTCGKDGMLTSAIKTRVKMEKAARGGNMALRYKK
MDGDYDSADRECFSCFYDLHLSAVSCQCSPNRFACLNHANILCSCEMDRKTALLRYTIEE
LHTLVAALEGDPTAVYQWGQNDLGLVCPSGSTQYKKMDLGENTEFPDSATNVNHGCSLGS
QDQYHYDPAKPAGYQQEKGIQIASEKHDKNKMVVNLESPATASNPSRSKSDCSGSLSLNH
SSELPSSRIQTGNSTLASITTEKLFGVDIKSNLAQSSDGQVSQLAKPSSSQTDEVSKPAI
AKYTVELLDSGTMMIGKKWCNQQAIFPKGFKSRVTFHSVLDPTRTCCYISEVLDAGLLGP
LFRVTVEGLPEVSFTHTSPMQCWDSVRDRVNEEIAKQISFGKSGLPDFLSCNSLNGLEMF
GFLSSPIIKEIEALDPCHQCLDYWLSRVSSVGTELPSESVMAAMVNDSTNPPIKLLGIEI
NRRESEQSSSFNNSCVRRSHLAGC
NT seq 2955 nt   +upstreamnt  +downstreamnt
atggagatagcttccgcggccgcccaccaaatctcgcccatggtttcctcccgcgacccc
ggcgaggaggccagcgcgccgccgcccccgcccccgcgccgcggcgagaagcggcgaatg
cgcggccgcaccccgtcgccggagccggcctccgcgccgcaggatctctgcccatcagga
gcttgcggggacaatgttgctggagctacaactacaaatggaaagtggcatccacatgaa
tcgtacagacctgaaattgatgatgcccctgttttcactccaacggaagaggagtttaaa
gatccaattagatatattacgagcattcgtccccaagcagaaaagtatggaatttgtcgt
attgttccaccatcttcttggcgaccgccttgttctctgaaggagaagaacttctgggaa
tgtacagagttcaatacccgtgttcaacaagttgacaagcttcaaaaccgggaacccaca
aagaaaaaatcacaacctcgagttcagaagaagaggaagaggagaaagagactgagattt
gggatgactcacaggcgtcctagtgcaaatacatcagaagactgcgcagatgcagacgag
aagtttggctttcaatctggctcagatttcacactagatgagtttcagaaatatgcagat
gagtttaagcagcagtattttggaataaagggaagtgacgaaatccctctttctgaaatt
aaaaagaagaaaaaaaattggcaaccatcggtcgatgaaatagagggagaatattggcgg
atagttgtatgccccactgacgaagttgaggtggattatggtgctgatttggacacttca
atgttcagtagtggattctctaaattatcttcagattcaaatagacgagatccatatggt
ttatcttgttggaatttgaacaatcttccacgtattcctgggtctgtactgtcatttgaa
actgaggatatatctggcgtcgtagtcccttggctttatgtagggatgtgcttctcatca
ttctgttggcacgtggaagatcatttcctttattctatgaattacatgcattttggtgaa
ccaaaagtatggtatggtgttcctggtgctgatgcagtgaagctggaagaagctatgaga
aagaacttaccaagattgtttgaagaacagcctgatctcctacatgagctggttacgcaa
ttatctccttctgttcttaaatcagaaggagttcctgtttatcgtgttgttcagaatcca
ggcgagtttgttctaacgctaccgcgagcttaccattctgggttcaactgtggcttcaac
tgtgcggaggcagtaaatgtcgcacctgtggattggctgcctcacggacaatgtgctgtt
gagctctacagggagcagcggcgcaagacatccatatcacatgacaaattattactaaaa
actgcaaatgaagctgtcagacagctttggatgaaccttagcgactgcaaaagtgaacaa
ggagtatacagatggcaggatacttgcggaaaggacggaatgctgacaagtgcaattaag
acaagggttaaaatggagaaggcagcacggggagggaatatggcactgcgatataagaaa
atggatggggattatgattcagctgaccgggaatgcttttcatgtttttatgatctccat
ttgtcagctgtcagctgccaatgctccccaaatcgttttgcttgcttaaaccatgcaaac
attctatgttcatgtgaaatggacagaaaaaccgcgttgttgcggtataccatagaggag
ctccatactcttgttgcagctctagagggtgatccaactgcggtctaccagtggggacag
aatgatttaggtttagtctgcccatctggttctactcagtacaagaagatggacttgggt
gaaaacacggaatttccggattcagcaaccaacgtcaatcatggctgcagcttaggaagt
caagatcaatatcactatgaccccgcaaagccagcaggataccagcaagagaagggaatc
cagattgcttcagaaaaacatgataagaacaagatggttgtcaatcttgagtctccagca
acagctagtaatccaagcaggtcaaagtctgactgcagtggctcactgtccttgaatcat
tcatctgagttaccatcttcaagaattcaaacaggaaattctacgctagcttccattacc
acagagaaactgtttggtgttgacattaaatccaatttagcacagtcttctgatggccaa
gttagtcaattggccaagccttcctcgagccaaactgatgaagtctctaagccagcaata
gctaagtatacggttgagctgctagacagtggaacaatgatgattggtaaaaagtggtgc
aatcagcaagctatattccccaaaggatttaagagtcgagttacatttcatagtgtacta
gatccaacaaggacatgctgctacatctccgaagttcttgatgctgggcttcttggacca
ttgtttagggtgactgtcgaaggtcttccagaagtttcgtttactcacacatcaccaatg
caatgttgggacagtgtaagagacagagtaaatgaagaaatagcaaaacaaataagtttt
ggaaaatctggccttcctgattttctatcctgcaattctttgaatggacttgaaatgttt
gggttcttatcctcccctataattaaggaaatcgaggctctagatccctgtcaccaatgc
ttggactattggttgtcaagggtttcttctgttggaactgaactcccctcggaatctgtg
atggcagcaatggttaatgactccactaaccccccaataaagttgctcgggattgagatt
aaccggagggaatcagaacaatcaagtagcttcaataattcctgtgtgaggaggtcacac
ttggcaggttgctga

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