Oryza sativa japonica (Japanese rice): 4338385
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Entry
4338385 CDS
T01015
Name
(RefSeq) uncharacterized protein isoform X1
KO
K11096
small nuclear ribonucleoprotein D2
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
4338385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
osa03041
]
4338385
03032 DNA replication proteins [BR:
osa03032
]
4338385
Spliceosome [BR:
osa03041
]
Complex A
U1 snRNP components
Sm proteins
4338385
U2 snRNP components
4338385
Complex B
U1 snRNP components
4338385
U4/U6.U5 tri-snRNP components
4338385
Complex C
U2 snRNP components
4338385
DNA replication proteins [BR:
osa03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
4338385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
4338385
NCBI-ProteinID:
XP_015637506
LinkDB
All DBs
Position
5:complement(join(14529710..14529826,14529913..14530017,14531630..14531710,14531817..14531834))
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AA seq
106 aa
AA seq
DB search
MAEEATQQGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHCNMVLE
NVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagccactcagcaggggaagaaggaggaggaggaattcagtacggggccg
ctgtccgtgctgatgatgagcgtgaagaacaacacccaggtgcttatcaattgccggaac
aacaagaagttgcttggtcgtgtgagggcatttgatcgccattgcaacatggttcttgag
aatgttagggagatgtggactgaggtaccaaagactggtaaaggcaagaagaaggctctt
ccagtgaacaaggacaggttcattagcaagatgttcctacgtggggattcggtcatcatt
gtgctcaggaacccgaaatga
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