Oryza sativa japonica (Japanese rice): 4338504
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Entry
4338504 CDS
T01015
Name
(RefSeq) SAGA-associated factor 11 isoform X1
KO
K11363
SAGA-associated factor 11
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
osa03021
]
4338504
03036 Chromosome and associated proteins [BR:
osa03036
]
4338504
Transcription machinery [BR:
osa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
4338504
Chromosome and associated proteins [BR:
osa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
4338504
SLIK complex
4338504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sgf11
zf-C2HC_2
Motif
Other DBs
NCBI-GeneID:
4338504
NCBI-ProteinID:
XP_015637869
LinkDB
All DBs
Position
5:complement(join(16714925..16715064,16715150..16715213,16717342..16717662,16717734..16717775))
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AA seq
188 aa
AA seq
DB search
MSSSTDAPVSPRSQFALACFEELLETAVVDVASECHRIARLGLDRGVDAEEEELRAWAAR
DHPGAEEGGGAVGGGGGNKGVVDVFGQVLPAVAADLVDCMNCGRPVAAGRFAPHLEKCMG
KGRKARTKTTRSSTAGRTRNNNVPVSQERITAITYCRSPEHLTVTPCFSHLTKYQCLGTM
AGLQHIPW
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcttccaccgacgcccctgtcagccctcgctcccagttcgcgctggcctgcttc
gaggagcttctcgagaccgcggtggtggacgtggcctccgagtgccaccgcatcgcgcgc
ctgggcctcgaccgcggcgtcgacgccgaggaggaggagctccgcgcctgggccgcccgc
gaccacccgggggccgaggagggcggcggcgccgtcggcggtggcggagggaacaagggg
gtggtcgatgtatttggccaggtgctccccgccgtggccgccgacctcgtcgactgcatg
aactgcggacgccccgtcgccgccggccgcttcgcccctcacctcgagaagtgcatgggc
aagggacgcaaagctcgcacaaaaacaacaagaagtagtaccgctggacgaactaggaac
aacaatgtgccagtgtcacaggagaggatcacagcaatcacatattgccggagccctgag
cacctgactgtaacaccgtgtttcagccaccttaccaaataccagtgtttgggcaccatg
gccggtctgcaacacattccttggtaa
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