Oryza sativa japonica (Japanese rice): 4338546
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Entry
4338546 CDS
T01015
Name
(RefSeq) UDP-glucuronic acid decarboxylase 2 isoform X1
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa00520
Amino sugar and nucleotide sugar metabolism
osa01100
Metabolic pathways
osa01250
Biosynthesis of nucleotide sugars
Module
osa_M00997
UDP-Xyl/L-Ara biosynthesis, UDP-Glc => UDP-Xyl => UDP-L-Ala
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
4338546
Enzymes [BR:
osa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
4338546
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Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
Polysacc_synt_2
adh_short
KR
RNF6_N
Motif
Other DBs
NCBI-GeneID:
4338546
NCBI-ProteinID:
XP_015639298
UniProt:
Q6I683
Q0DIU1
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All DBs
Position
5:complement(join(17443873..17444193,17444375..17444449,17444547..17444630,17444729..17444808,17445600..17445747,17446826..17447461))
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AA seq
447 aa
AA seq
DB search
MASELTYRGGGGATLAGEAEAAVAAGGYSPKPSKPLAWLPRAARYAAGEHRPLFALAGML
VAAAIFSLATPYSSSTPAAAAAGSTAANPLARFSVEPAVSRRQQQLPARQFVGGKVPLGL
KRKGLRVLVTGGAGFVGSHLVDRLVERGDSVIVVDNLFTGRKENVVHHFGNPNFEMIRHD
VVEPILLEVDQIYHLACPASPVHYKYNPVKTIKTNVVGTLNMLGLAKRINARFLLTSTSE
VYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANLEVRIARIFNTYGP
RMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLG
NPGEFTMLELAKVVQDTIDPNAKIEFRPNTQDDPHKRKPDIGRAKELLGWEPKIPLHKGL
PLMVTDFRKRIFGDQDSTATTTGGQQG
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggagctgacctaccgcggcggcggcggcgcgacgctggccggcgaggcggag
gcggcggtagcggcgggggggtactccccgaagccgtccaagccgctcgcgtggctcccc
cgcgccgcccggtacgccgccggcgagcaccgcccgctcttcgccctcgccgggatgctc
gtcgccgctgccatcttctccctcgccaccccgtactcctcctccacccccgccgccgcg
gccgccggttcaaccgcggcgaacccgctggcgcggttctcggtggagccggcggtgagc
cggcggcagcagcagctgccggcgaggcagttcgtgggcgggaaggtgccgctggggctg
aagcggaaggggctccgggtgctggtgaccggcggcgccgggttcgtggggagccacctg
gtggaccggctggtggagcgcggcgacagcgtgatcgtggtggacaacctgttcacgggg
cggaaggagaacgtggtgcaccacttcggcaacccaaacttcgagatgatccgccacgac
gtcgtcgagcccatcctcctcgaggtcgaccagatctaccacctcgcctgccccgcttcc
cccgttcactacaagtacaaccccgtcaagacaatcaagaccaatgtggttgggactctc
aacatgctcggattggcgaagaggatcaatgccaggttcctcctcaccagcaccagtgag
gtctacggtgatcccctgcagcatcctcaagtggagacttactggggcaatgtcaacccc
attggtgtgaggagttgttacgatgagggcaagcgcacagctgaaactttgaccatggac
tatcaccgtggtgccaaccttgaggttaggatcgctcgtatcttcaacacatatggccct
cgcatgtgcatcgatgatggccgtgttgtcagcaactttgttgctcaggctttgaggaag
gagcctttgacggtttacggtgatggcaagcagaccaggagtttccaatatgtctctgat
ctggttgagggattgatgaggctcatggaaggtgagcacgtagggccattcaacctgggt
aaccctggtgagttcaccatgctggagctggccaaggttgtccaggacaccatcgaccct
aacgcaaagatcgagttccgtcccaacacccaggacgacccgcacaagcgcaagcctgac
atcggccgtgccaaggagctccttgggtgggagccaaagatccctctccacaagggtctt
cccctcatggtcaccgacttccgcaagcgcattttcggtgaccaagacagcaccgccaca
accaccggaggccaacaagggtag
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