Oryza sativa japonica (Japanese rice): 4338603
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Entry
4338603 CDS
T01015
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2
KO
K03265
peptide chain release factor subunit 1
Organism
osa
Oryza sativa japonica (Japanese rice)
Pathway
osa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
4338603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
osa03019
]
4338603
03012 Translation factors [BR:
osa03012
]
4338603
Messenger RNA biogenesis [BR:
osa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
4338603
Translation factors [BR:
osa03012
]
Eukaryotic type
Release factors
4338603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
4338603
NCBI-ProteinID:
XP_066166601
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All DBs
Position
5:18118991..18120313
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AA seq
440 aa
AA seq
DB search
MGEGHETDKNIEVWKVKKLIKALDAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLAAITSAQQRLKLYSRVPVNGLVLYTGTIVTDDGKEKKVTFDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLYGTLSGNSREVLYKFSVDLPKKHG
RGGQSAVRFARLRMERRHNYLRKAAELATQFFINSATNQPNIAGLILAGSADFKTELGKS
EMFDPRLQAKVIKTLDVSYGGESGFNQAIEMSAEVLSDVKFVQEKKLIGKYFEEISQDTG
KYVLGVQDTITALEIGAVDTLIVWENLDVRRYELKNTATGETVIKYLNSDQEADQSNFVD
EATSGEFDVIDKPLLLEWFAENYQQYGCTLEFVTNKSQEGSQFCRGFGGIGGILRYPADV
AAFNDDDDDMLDEADYEDFE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagggacatgaaaccgacaagaacattgaagtatggaaggtcaagaaattgatc
aaggcacttgatgctgccaggggcaacggtacgagcatgatttcgcttatcatgccacct
cgtgatcaggtctcccgagtcaccaagatgctgggtgatgagtatggaactgcctctaac
atcaagagcagagtcaaccgtcagtccgtgttggccgccataacttctgcccaacagagg
ctgaagctgtatagtcgagttcccgtgaatggattagtgctctatactgggaccattgtc
accgatgacggcaaagagaagaaggtcaccttcgactttgagccgttcaggccgattaac
gcttcgctgtatctgtgtgacaacaagttccacacagaggcactgaatgagcttctggag
tctgatgacaagtttggtttcataatcatggatggcaacggaacactgtatggtacactt
agtggcaacagcagggaggttctttacaagttcagcgtcgatctcccgaagaagcacggg
cgaggagggcagtctgctgtccgctttgcccgcctgcgcatggagaggcgtcacaactac
ctgcgcaaggcggctgagcttgctacccagttcttcatcaattcagccaccaaccagcca
aacatcgctgggcttattcttgctggctctgccgatttcaagaccgagctgggaaaatct
gagatgtttgatccacgcttgcaagcaaaggtaatcaagactcttgatgtgtcatatgga
ggggagagtggcttcaaccaagcaattgagatgtctgcagaggtgctgtctgatgtcaag
tttgtccaagaaaagaagctgatcggcaagtactttgaggagataagccaggacaccggg
aagtatgtcctaggtgtgcaggatacaataacggcgctcgagataggtgctgtggataca
ctgattgtgtgggagaaccttgatgtcaggcgatacgagctgaagaacaccgccacagga
gaaacagtgatcaagtacctcaacagtgaccaggaggcagatcagagcaactttgtggac
gaggcaacatcaggagagtttgatgtcatcgacaagccgttgctgctggagtggttcgcg
gagaattaccagcagtatggctgcaccctggagtttgtcaccaacaagtcgcaggaagga
tcacagttctgccgtggctttggtgggatcggtgggatcctgcgctacccagccgacgtc
gctgccttcaacgatgacgatgacgacatgctggatgaggccgactatgaagactttgaa
tag
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