Oryza sativa japonica (Japanese rice): 4338816
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Entry
4338816 CDS
T01015
Symbol
OsJ_18575, P0426G01.9
Name
(RefSeq) pHD finger protein ALFIN-LIKE 5
KO
K26274
PHD finger protein ALFIN-LIKE
Organism
osa
Oryza sativa japonica (Japanese rice)
Brite
KEGG Orthology (KO) [BR:
osa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
osa03000
]
4338816 (OsJ_18575)
Transcription factors [BR:
osa03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
4338816 (OsJ_18575)
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Paralog
GFIT
Motif
Pfam:
Alfin
PHD
PHD_JHD1
PHD_UBR7-like
PHD_NSD
PHD_Pygo
Motif
Other DBs
NCBI-GeneID:
4338816
NCBI-ProteinID:
NP_001407444
LinkDB
All DBs
Position
5:join(20646214..20646316,20646461..20646493,20647177..20647405,20650022..20650151,20650218..20650499)
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AA seq
258 aa
AA seq
DB search
MDGGSGGPYTSRTAEEVFRDFRGRRAGMIKALTTDVEKFYQLCDPEKENLCLYGYPNETW
EVTLPAEEVPPEIPEPALGINFARDGMNEKDWLALVAVHSDSWLLAVAFYFAARFGFDKE
ARRRLFNMINNLPTIFEVVTGAAKKQTKEKAPNSTNKPNKPSSKMQPRPESHSKAPKPPA
PPKDDDESGDEYADEEEEERDNTLCGSCGTNDGKDEFWICCDSCERWYHGKCVKITPARA
EHIKHYKCPDCGNKRARA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggacggaggctccggggggccgtacacctcccgcacggccgaggaggtcttccgcgac
ttccgcggccgccgcgccggcatgatcaaggccctcaccaccgatgtggagaagttctac
cagctctgcgacccagaaaaggagaacttgtgcctttatgggtaccctaatgaaacatgg
gaagttaccttgcctgctgaggaagttcctccggagatccctgaaccagctttaggaatc
aattttgctagggacggcatgaatgagaaagactggttggcactagttgctgtccacagt
gattcatggctactggctgttgcgttttatttcgcagcacgatttgggttcgacaaagag
gccaggaggcggctcttcaacatgataaataacttacctacaatatttgaagttgtgact
ggcgctgccaagaaacagaccaaggagaaggcgcccaacagtaccaacaagcccaacaag
cccagctcaaaaatgcaaccaagaccagagtctcattcaaaggctccaaaaccacctgca
ccccccaaggatgatgatgagagcggcgatgagtatgcagacgaggaggaggaggagcgc
gacaacaccctgtgcggatcttgtggaacaaatgatggcaaagatgagttttggatctgt
tgtgatagttgcgagcggtggtaccatggaaagtgcgtgaagatcacacctgctcgagcc
gagcatatcaaacactacaagtgcccagattgcggcaacaagagggcaagggcatag
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