KEGG   Oryza sativa japonica (Japanese rice): 4338868
Entry
4338868           CDS       T01015                                 
Name
(RefSeq) serine hydroxymethyltransferase 7 isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
osa  Oryza sativa japonica (Japanese rice)
Pathway
osa00260  Glycine, serine and threonine metabolism
osa00460  Cyanoamino acid metabolism
osa00630  Glyoxylate and dicarboxylate metabolism
osa00670  One carbon pool by folate
osa01100  Metabolic pathways
osa01110  Biosynthesis of secondary metabolites
osa01200  Carbon metabolism
osa01230  Biosynthesis of amino acids
osa01240  Biosynthesis of cofactors
osa04981  Folate transport and metabolism
Module
osa_M00532  Photorespiration
Brite
KEGG Orthology (KO) [BR:osa00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    4338868
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    4338868
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    4338868
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    4338868
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    4338868
Enzymes [BR:osa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     4338868
SSDB
Motif
Pfam: SHMT HNH_2 Beta_elim_lyase WDR55
Other DBs
NCBI-GeneID: 4338868
NCBI-ProteinID: XP_066166731
LinkDB
Position
5:complement(join(21156904..21157014,21157467..21157642,21157735..21157836,21158876..21159281,21159760..21160791))
AA seq 608 aa
MLDRATGGRRRAAGEGMDHRPDLSLALHPPPPPEGSSAAAAEEVGEEEAEGGEGRFSLMG
QPLFLKRPRPRPPRPPRARGVGDDVDVDVDDDSSPCCSSSCLSPAAKRRAAAGGLEARRA
AVRAWGCQPLTEADPDVHELMERERRRQAGGVELIASENYACRAVLDALGSHLTNKYSEG
LPGARYYCGNQHIDAIERLCCDRALAAFGLDPSRWGVNVQPYSCTSANFAVYTGLLLPND
RIMGLDSPSGGHVSHGYYTPSGKKVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHP
KILICGASSYPRDWDYARMRLVADKCGAVLMCDMAQISGLVAAKECRNPFDYCDIVTSTT
HKSLRGPRGGIIFFRKGKNLRKRVGSLTQVVENDQYDFEDRINFAVFPSMQGGPHNNHIA
ALAIALKQVAMPEFKAYIQQVKKNAQALAMALLRRKCRLVTGGTDNHLMLWDLRTFGLTG
KNFEKVCEACHISLNKTPIYGDNGSISPGGVRIGTPAMTTRGCLESDFEIMAEFLLRAAH
IASIVLKEHGRLQKDFLKGLENNNDIIELRNQICLIFSISRRYIIFVSEVIMTPEPKVKI
NFLAWLHL
NT seq 1827 nt   +upstreamnt  +downstreamnt
atgctcgatcgcgcgacgggggggcggcgccgcgccgcgggcgaagggatggaccatcgg
cccgacctgtccctcgccctccacccgccgccgccgcccgagggctcgtccgccgccgcc
gccgaggaggtgggggaggaggaggccgaaggcggcgaggggcggttctccctcatgggc
cagccgctcttcctcaagcggccgcggccgcggcccccgcgcccgccccgcgcgcgcggg
gtgggggacgacgtcgacgtcgacgtcgacgacgactcatccccgtgctgctcctcctcc
tgcctctcgcccgcggcgaagcggcgggcggcggcgggaggactcgaggcgcgccgcgcg
gccgtgcgcgcgtggggatgccagccgctcacggaggcggacccggacgtgcacgagctg
atggagcgggagcggcgccggcaggcgggcggggtcgagctcatcgcctccgagaactac
gcctgccgcgcggtgctcgacgcgctcggcagccacctcaccaacaagtactccgagggc
ctccccggcgcgcgctactactgcggcaaccagcacatcgacgccatcgagcgcctctgc
tgcgaccgcgcgctcgccgccttcggcctcgacccgtcgcgctggggcgtcaacgtgcag
ccctactcctgcacctccgccaacttcgccgtctacacggggctcctcctccccaacgac
aggatcatgggcctcgactcgccgtccggcggccacgtcagccacgggtactacacgccc
agcggcaagaaggtctccggcgcctccatcttcttcgagaacctctcctacagggtgaac
ccgcacaccgggtacatcgattacgataaggtagaggagaaggccgtggatttccacccc
aagattctcatctgcggcgcgagctcgtatccaagggattgggactatgcacggatgcgg
cttgttgctgataagtgcggcgcagtactcatgtgtgacatggcacaaatcagtggtctt
gtggcagcgaaggaatgtcgaaatccctttgactactgcgatattgttacttcaaccaca
cacaagagcttgaggggtcctagaggtggtataatatttttcaggaaagggaaaaatcta
aggaaacgggtcggatctttaactcaagtggttgaaaatgatcagtatgattttgaggac
cgtataaattttgctgttttcccttcaatgcaaggtggaccccacaataaccatattgct
gctctggctatagctctaaaacaagtagccatgccagaattcaaagcatacattcaacaa
gtcaagaaaaatgcccaagctttggcgatggccttgctcaggaggaaatgcagactggtt
actggtggcacagataatcatttgatgctctgggacctaagaacatttggcttgacaggg
aagaactttgagaaggtctgtgaggcatgtcatatctctcttaataaaacaccaatatat
ggagataatggttcgatttctcctggaggtgtgcggattggaactcctgccatgacaact
agaggttgcttggagagtgactttgagataatggcagaattccttttgagggcagcacat
atagcaagtattgttttgaaggagcatggaaggcttcagaaggattttctgaaaggtctg
gagaacaataatgacattattgaactccggaatcagatttgtctcatcttttccatttca
agaaggtatataatctttgtgagtgaagttatcatgactcctgaaccaaaggtaaaaatt
aactttcttgcatggttgcatctttaa

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